Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed05g3741 | ATGGATTTTGATCTCTTGCTTTGTATTTTACTATCCCTTATCTCTCTTCTTCTTGGATACACCTTTCTATGGCAACCTGAATCCAAGAACATCCCACCAACTCCACCTTTTTCTCTTCCATTCATAGGCCATTTCCATCTCCTCAAACACCCTGTCCACCAAACACTTCAAAAACTCTCACAAAAGTACGGCCATGTCTTCTCTCTTCGATTCGGTTCCCGTCTCGTCGTAATCGTATCGTCTCCCTCCGCCGTACAAGAATGCTTTACAAAGAACGACATCGTCCTCGCAAATCGGCCAGTCTTGACCAGTGGAAAGTACTTGGCATACAACAACACCACCATGGTGGTCAGTCCTTACGGCGAACATTGGCGAAACCTCCGCCGAATCAGCGCGCTCGAGATTTTCTCAACGATCCGCCTTAATTCGTTCTTGGGAATTCGAGAAAATGAAGTCAAACGCTTACTATGCAAGTTACGGGGAGATTATTCGAGGGACGAGTTTCGGGTGGTGGAATTGAAGCCGATGTTGTTAGATTTAACGTTTAATATTGTCATGAGAATGGTGGCTGGAAATAAGTTTGATCATGATGAGGGATATTCGAAGAGATTTAGAAATTTGGTGACACAAATTATGGCTCATGGTGGGTCAACGAATCTGGTTGACTTTATACCATTATGGAATTGGATTGATCCAAGTGGTTTTAAAAAGAGATTAATGAAGCTTGGGAAAAGAGCAGATGAAGTTATTCAAGGCTTAATTGATGAGATTCGAAATAATAAGGATGAAGGAAACACTATGATTGACCATTTACTTAGCTTTCAGAACACCCAGCCTGAATATTTTAGTGACCAAGTTATCAAAGGTCTAATACAAGATATATTATTAGCCGGAATTGACTCAACTGCACTTACCTTAGAATGGGCGCTATCTCATTTACTCAACAACCCAAACGTTTTAAGAAGAGCTAGAGACGAAATAGATTCTTCCATTGGACACAAGCGCATGATTAGTGAACTTGACTTATCAAGCTTAACTTATTTGCCAAAAGTAATCTCTGAGATTCTACGGCTAAGCCCGGCTGGTCCATTACTTGTTCCACACTACGCATCTGAAGATTGCAAAATACAAGGCTATGATATTCCACGTGGCACAATTATATTGGTTAATGCTTGGGCCATACACAGAGATTCAAAGGTGTGGGAAAATGCCACTAGTTTTAATCCCCAAAGACATGGAAATGTTAGTGGAGCTGATTCAATGTACAAATTATTACCGTTTGGTTTGGGGAGAAGAGCTTGTCCTGGTATGGGAATGGCTCAGCGCGTGGTTGGCTTAACTTTGGCGTCGTTGATTCAATGTTTTGAATGGAAAAGAGTTGGTAATCTATTGGTTGATATGACTGAAGGTGAAGGACTAACTATGCCTAAAGTTGAGCCATTAGTAGCCAAGTGTAGACCGCGCACAACCATGGAAGTTATGCTTACGGAAGTCATTGGTCATGCCAACACAAGAGAGCTTTAA | 1524 | 41.54 | MDFDLLLCILLSLISLLLGYTFLWQPESKNIPPTPPFSLPFIGHFHLLKHPVHQTLQKLSQKYGHVFSLRFGSRLVVIVSSPSAVQECFTKNDIVLANRPVLTSGKYLAYNNTTMVVSPYGEHWRNLRRISALEIFSTIRLNSFLGIRENEVKRLLCKLRGDYSRDEFRVVELKPMLLDLTFNIVMRMVAGNKFDHDEGYSKRFRNLVTQIMAHGGSTNLVDFIPLWNWIDPSGFKKRLMKLGKRADEVIQGLIDEIRNNKDEGNTMIDHLLSFQNTQPEYFSDQVIKGLIQDILLAGIDSTALTLEWALSHLLNNPNVLRRARDEIDSSIGHKRMISELDLSSLTYLPKVISEILRLSPAGPLLVPHYASEDCKIQGYDIPRGTIILVNAWAIHRDSKVWENATSFNPQRHGNVSGADSMYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWKRVGNLLVDMTEGEGLTMPKVEPLVAKCRPRTTMEVMLTEVIGHANTREL | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 45299043 | 45302675 | + | Sed0018756.1 | Sed05g3741 | 716367 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed05g3741 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 390 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | FunFam | Cytochrome P450 family protein | 24 | 491 | - | - | |
| Sed05g3741 | 507 | Gene3D | Cytochrome P450 | 25 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | Pfam | Cytochrome P450 | 33 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | CDD | CYP81 | 64 | 481 | - | - | |
| Sed05g3741 | 507 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PRINTS | P450 superfamily signature | 434 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g3741 | 507 | PANTHER | CYTOCHROME P450 82C3-RELATED | 16 | 489 | IPR050651 | - | |
| Sed05g3741 | 507 | SUPERFAMILY | Cytochrome P450 | 32 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed05g3739 | Sed-Chr5:45286073 | Sed05g3741 | Sed-Chr5:45299043 | 4.20E-192 | dispersed | |
| Sed05g3741 | Sed-Chr5:45299043 | Sed10g0673 | Sed-Chr10:4644986 | 1.10E-158 | dispersed | |
| Sed05g3740 | Sed-Chr5:45291773 | Sed05g3741 | Sed-Chr5:45299043 | 4.10E-195 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed05g3741 | K13260 | - | csv:101205626 | 757.288 |