Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3780 ATGGCCGTCGCCGTCGCCGCCGACTGCTCCACCGACTTCGCTGACGCCACCCGCTGTCGCGACGGCGCCGCCGCCGCTCACCTGAAAACAATCTCGATCTTCCTAATCTTCATCACAAGCGTCATCGGCGTGTCCCTGCCGGTAATCCTGACGCGCTTCTTCCAGGGCAAAGCACTGTACGACAAAGCCATCCTCGTCATCAAGTGCTTCGCCGCCGGCGTAATCCTCTCCACGTCACTCGTCCACGTCCTCCCCGACGCCTTCGCCGCGCTCTCCGACTGCCACGTGGCGTCGCAGCACCCCTGGCGCGACTTCCCCTTCGCCGGCCTCGTCACCATGGTCGGCGCCCTGCTGGCGCTCCTCGTCGACGTTACGGCCACTTCGCACGTGTCGCACGGGCACTACGATCCAGTGCTCGAGGGAACGGAGTCGGGGGGTGAGATGGGGCTGCTGGGGAGGGAGAATTCGAAATCGGAGATGGGGGATATGGAGGGGAGTTGCGAGGGGAAACCGAGCGACGAGGAAATGGTGAAGATGAAGCAGAGATTGGTGTCGCAGGTTTTGGAAATAGGGATTATTTTCCATTCGGTAATAATTGGAGTGACGATGGGAATGTCACAAAATCAGTGCACTATTAAGCCTTTGGTTGCTGCTCTTTCCTTTCATCAGATTTTTGAAGGAATGGGCCTTGGCGGTTGTATTGCTCAGGCAGGATTTAGCCTCACAACAACCTCATATATGTGTTTCATGTTCTCAGTAACAACACCAATGGGAATAGTGTTAGGAATGATATTGTTTTCGATAACCGGTTACGATGATAGTAGTACCAAAGCCTTGATTATGGAAGGTTTATTAGGATCGTTTTCATCCGGGATTCTCATATACATGGCTCTGGTTGATCTAATAGCTCTCGATTTTTTTCACAACAAGATGATGAGCTCAAATCAACGGCTTAAGAAGGTTTCGTTTATAGCCCTATTGCTCGGATCAACTTCCATGTCGATTTTGGCCTTGTGGGCATGA 1023 52.98 MAVAVAADCSTDFADATRCRDGAAAAHLKTISIFLIFITSVIGVSLPVILTRFFQGKALYDKAILVIKCFAAGVILSTSLVHVLPDAFAALSDCHVASQHPWRDFPFAGLVTMVGALLALLVDVTATSHVSHGHYDPVLEGTESGGEMGLLGRENSKSEMGDMEGSCEGKPSDEEMVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALSFHQIFEGMGLGGCIAQAGFSLTTTSYMCFMFSVTTPMGIVLGMILFSITGYDDSSTKALIMEGLLGSFSSGILIYMALVDLIALDFFHNKMMSSNQRLKKVSFIALLLGSTSMSILALWA 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45556015 45558023 - Sed0013600.1 Sed05g3780 716406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3780 340 Pfam ZIP Zinc transporter 27 337 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Sed05g3780 340 NCBIfam ZIP zinc/iron transport family 14 340 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Sed05g3780 340 MobiDBLite consensus disorder prediction 157 171 - -
Sed05g3780 340 PANTHER ZINC/IRON TRANSPORTER 25 339 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Sed05g3780 340 MobiDBLite consensus disorder prediction 142 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3780 Sed-Chr5:45556015 Sed06g1122 Sed-Chr6:31962100 3.50E-57 dispersed
Sed05g3780 Sed-Chr5:45556015 Sed11g0883 Sed-Chr11:21321665 1.30E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3780 K14709 - csv:101214729 509.605