Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3802 ATGGGAGCTTCGCTCTTACGTCTCCATTTCCACGACTGTTTTGTTAACGGTTGTGATGGGTCGGTTTTGTTGGATGATACCGCTACCTTTACCGGAGAAAAGACCGCCGCACCTAATCTAAACTCGATTAGAGGACTCGAAGTTGTTGATGAGATTAAGACACAAGTTAACAAAGCTTGCAAAGGCAACGTTGTGTCTTGTGCTGACATCTTAGCCGTTGCTGCTCGGGACTCTATTGCTATTCTTGGTGGGCCAAACTACAAAGTACTGTTAGGAAGAAGAGACGCAAGAACAGCAAGCAAAAACGATGCCAACACAAATCTTCCCGCACCATTTTTCAGCTTCTCACAGCTTATATCCAACTTCCAATCTCATGGCCTCGACCTCAAGGACCTCGTCCTCTTATCGGCCGGACATACCATCGGCTTTGGCCAATGCAGATTTTTCCGAAGCAGGATATACAACGACACGAACATCGACCCAAAATTCGCAGCCATGCTGCAGGCGAACTGCCCGCCAGTCGGCAACGATAACAATCTGCAGGGCATTGACAATACTCCACATTTCTTTGACACTGCCTACTTCAAGGACTTGTTGAAGAAGAAGGGTCTTTTCCATTCCGACCAGGAACTCTTCGGCGGCGGCAACGAGGACAGTGATGATTTGGTGTCGTTCTATAGCCGCTATCCCAATGATTTTAGAAATGACTTTGCTTCTTCCATGATCAAAATGGGAAATCTGATGCCACTCACTGGAAGTGATGGTGAAATTAGAGCTAATTGCAGGGTTGTTAATTACTAA 801 46.32 MGASLLRLHFHDCFVNGCDGSVLLDDTATFTGEKTAAPNLNSIRGLEVVDEIKTQVNKACKGNVVSCADILAVAARDSIAILGGPNYKVLLGRRDARTASKNDANTNLPAPFFSFSQLISNFQSHGLDLKDLVLLSAGHTIGFGQCRFFRSRIYNDTNIDPKFAAMLQANCPPVGNDNNLQGIDNTPHFFDTAYFKDLLKKKGLFHSDQELFGGGNEDSDDLVSFYSRYPNDFRNDFASSMIKMGNLMPLTGSDGEIRANCRVVNY 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45692579 45695942 - Sed0021556.1 Sed05g3802 716428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3802 266 CDD secretory_peroxidase 1 264 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 239 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 83 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 130 142 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PANTHER PEROXIDASE 72-RELATED 1 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Haem peroxidase superfamily signature 131 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 PRINTS Haem peroxidase superfamily signature 83 95 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601(InterPro)
Sed05g3802 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 131 141 IPR019793 -
Sed05g3802 266 SUPERFAMILY Heme-dependent peroxidases 1 265 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 Gene3D Peroxidase, domain 2 109 244 - -
Sed05g3802 266 Pfam Peroxidase 1 213 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 Gene3D - 1 262 - -
Sed05g3802 266 ProSiteProfiles Plant heme peroxidase family profile. 1 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g3802 266 FunFam Peroxidase 109 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3802 Sed-Chr5:45692579 Sed05g3805 Sed-Chr5:45703213 3.20E-82 dispersed
Sed05g3801 Sed-Chr5:45692405 Sed05g3802 Sed-Chr5:45692579 5.30E-156 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3802 K00430 - csv:101204979 448.358