Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0010 | ATGAATTATTTTAAAAATTATGCTACAAATATAATACAAGAGGTAGAATATGCCGCTGACGGTAAATTCTCTAATATTAATGTTGATGAAACTTATCATCTGGTGAATGTGGACCAACCGCAATGTCGGATATGCCTTGACACCGAAAAATTAGCTTTGAGGCGAAGATTTAATTGCTTCATGCTACTGCAAAGGCACTCAAATCAAAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGCCCACAAATGATATGGAGGGCTTTGCTTTTGTTCATTCTTCAAAGTGCAAAGCTATGTTTGTGCTACGCGCAAATGTCCTTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAGTTTCCGTTGCTAGGGACCATGCATTGTGGCATTCTTGGGGTGTTGGTGTACAAGTTCTACGGGGAGGAACCAAGGGAAATGTTTGGTTACGAAGAACACTCCTATGGGTTCTATGCCATGGCTGTCTTGGCTATCATCTTGGTTGGTTTACTATATGGTTTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAATTGACAAAGGAATATATAGTCGAAGATCGTGAACAAAACAAAAATGTTCTTGAACTGGATCCCAGTCATGTTATGGAGCTAAGGATGTTGGGCCTGTATTGA | 687 | 40.61 | MNYFKNYATNIIQEVEYAADGKFSNINVDETYHLVNVDQPQCRICLDTEKLALRRRFNCFMLLQRHSNQKYVHRSCLDNWRPTNDMEGFAFVHSSKCKAMFVLRANVLPDRWWLRLKFQFPLLGTMHCGILGVLVYKFYGEEPREMFGYEEHSYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREQNKNVLELDPSHVMELRMLGLY | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 104718 | 106349 | + | Sed0025199.1 | Sed06g0010 | 716553 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0010 | 228 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 29 | 165 | - | - | |
Sed06g0010 | 228 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 102 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g1317 | Sed-Chr1:9859853 | Sed06g0010 | Sed-Chr6:104718 | 6.30E-83 | dispersed | |
Sed01g1318 | Sed-Chr1:9859853 | Sed06g0010 | Sed-Chr6:104718 | 6.30E-83 | dispersed | |
Sed06g0010 | Sed-Chr6:104718 | Sed12g2385 | Sed-Chr12:33719826 | 8.10E-10 | dispersed | |
Sed06g0010 | Sed-Chr6:104718 | Sed14g1078 | Sed-Chr14:20290848 | 1.20E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0010 | - | - | - | 0.0 |