Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0018 | ATGGAGCCGCCTCACGATGTTTCAGAGACGCCGGAGCAGATTATACTCCGCTGGGACTCCGCCGCGCCGGAGGAACTCAGGGATGACATGCTCTTCGACTCCGACAGGGAAGAGATCGACCGATACTTGCGGGCCGTCGACCAAATCCAGGCCTCCATGTCCTCCGCCTCCTTGTCGGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCCAGGCTCGAGGACGAGTTCCGCCACATTCTGTCCACTCACACCACTCCCATCGAGCTCGACTCGCTCACGGATCCGAGTCCTTCTTCTCGCTCCATGTTGAGTAGTGCCAGTGGCGTATTCGAGGACGACAACGACGCCGAAGAGGCGGATTTGCAGGAACTTCAGCTCGATTTAAGCGGTAGTCCAAGTTTTGGATCAAGTGGACGATCCAGCTATCGGGCGACCAGCAGTATTCGAGAAATTGATCTGATTCCTTCGGATGCGATTCTCGATCTACACAGTATTGCTGAGCGGATGATATTGGCGGGGTACCTGCGCGAGTGCATCCAAGTCTATGGCAGTGTGCGTAAGTCCACCTTCGACTCCAGCTTCAGATTGCTCGGAATTGAGAAACTAAGCATTGGAGACATCCAGAGGCTGGAATGGAAAGAGCTGGAGACGAAGATCAGAAGGTGGATCCGAGCGGCCAAGATTTCCATTAGAACTCTGCTTTCCAGCGAAAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACCGCCATAGACGATGCTTGCTTCATGGAGACTGTCAAAGGCCCCGTCACTCAGTTGTTCAATTTCGCCGAAGCCATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGACGCCTTGACGGATTTGATACCGGACATTGATGTAATATTCGAATCCAAATCTGCGGATTATATTCGGGTTCAGGCGGCGGAGATATTGTCGCGGCTGGCGGAGGCCGTGAGAGGGACTTTATCGGAGTTTGAAAACGCGGTGCTGCGAGAGCCGTCGGTGCATCCGGTGCCCGGCGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCCGATTACAAAGTGACCTTAGACGAGCTCATTGTGTCCAAACCATTGACCGGCTCGAGGTACTCGGCCGACCCCACAACTCCAGATATGGATTTCGCCGAGCTAGAGGGCAAAACGCCATTAGCCCTCCACCTGATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAAAGACCCTTCGTTAGCCCATCTCTTTATCATGAACAACGTCCATTACATCGTTCAGAAGATAAAAGGATTCCCAGAATTGCGAGAAATTATCGGAGATGTTCATCTGAGAAGGATGACCGGGAAGTATCGGCAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGTCTGCGAAACGAAGGGTTGAATTTGGGGGGGAGCCTATCTTCCGCCCCCTCAAAGAGTGCTATTAGAGAGAGATTCAAGACTTTCAATGCCATTTTCGAGGAAGTTCACAGGACACAATCGGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTTCGCATATCCATTACTATGACGTTGATCCCAGCCTACAGGTCGTTTCTTGGCCTCCATGGCCACCGAATTGAGAGTGGAAGGCACCCAGAAAACTACATCAAGTACTCGGTCGAGGAACTCGAAGAATCCATATTGGATTTCTTTGAGGGTTCCTCAGTAACCCAGAACTTGAGAAGGAGATCTCACTGA | 1836 | 51.47 | MEPPHDVSETPEQIILRWDSAAPEELRDDMLFDSDREEIDRYLRAVDQIQASMSSASLSDDQNKVDSTMQIAMARLEDEFRHILSTHTTPIELDSLTDPSPSSRSMLSSASGVFEDDNDAEEADLQELQLDLSGSPSFGSSGRSSYRATSSIREIDLIPSDAILDLHSIAERMILAGYLRECIQVYGSVRKSTFDSSFRLLGIEKLSIGDIQRLEWKELETKIRRWIRAAKISIRTLLSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFESKSADYIRVQAAEILSRLAEAVRGTLSEFENAVLREPSVHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPLTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGFPELREIIGDVHLRRMTGKYRQAATNYERTTWVNVLYCLRNEGLNLGGSLSSAPSKSAIRERFKTFNAIFEEVHRTQSAWLIPDSQLREELRISITMTLIPAYRSFLGLHGHRIESGRHPENYIKYSVEELEESILDFFEGSSVTQNLRRRSH | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 141779 | 144651 | - | Sed0014349.1 | Sed06g0018 | 716561 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0018 | 611 | Gene3D | Exocyst complex component Exo70 | 14 | 607 | - | - | |
Sed06g0018 | 611 | MobiDBLite | consensus disorder prediction | 91 | 112 | - | - | |
Sed06g0018 | 611 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 12 | 600 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Sed06g0018 | 611 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed06g0018 | 611 | Pfam | Exocyst complex component Exo70 N-terminal | 12 | 85 | - | - | |
Sed06g0018 | 611 | Pfam | Exo70 exocyst complex subunit C-terminal | 225 | 594 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Sed06g0018 | 611 | MobiDBLite | consensus disorder prediction | 91 | 118 | - | - | |
Sed06g0018 | 611 | SUPERFAMILY | Cullin repeat-like | 4 | 598 | IPR016159 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g2974 | Sed-Chr1:27006421 | Sed06g0018 | Sed-Chr6:141779 | 4.80E-87 | dispersed | |
Sed03g0894 | Sed-Chr3:5548698 | Sed06g0018 | Sed-Chr6:141779 | 4.10E-86 | dispersed | |
Sed06g0018 | Sed-Chr6:141779 | Sed12g2505 | Sed-Chr12:34551622 | 1.00E-120 | dispersed | |
Sed06g0018 | Sed-Chr6:141779 | Sed06g2306 | Sed-Chr6:46432933 | 6.10E-286 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0018 | K07195 | - | csv:101204229 | 1046.96 |