Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0150 ATGTATTGTTTTCATATTGATTTACAGTATATACTTGAAGCCAATGCCTATCCCAGAGAGCATGCACTATTGAAGGAACTCAGAGAGACAACCTACGCGAAGCTCGACAAGTCGCAAAGCGTTATGAACGTACCAGCGGATGAAGGATTGTTTCTATCGATGCTTTTGAAATTGATGAACGCAAAGAAAACCATCGAAATCGGCGTATTCACTGGCTATTCGCTCCTGGCCACTGCCCTTGCACTGCCCGCTGATGGCCAGATAACAGCCATTGACGTGGATAGAAAAGCATTCGAGATTGGTTTGCCGTTTATAAAAGAAGCAGCAGTTGATCACAAAATCAATTTTGTGGAATCTCAGGCATCCATTGCCTTGAATGACCTCCTCAATGATGGCAAAGAGGGAGAGTTTGATTTTGCATTTGTGGATGCTAACAAATCAGAATACATCAAATATCACGAAAAGCTTCTAAAATTGGTGAAGATTGGGGGAGTAATTGCGTATGACAACACATTGTGGTTCGGTTCAGTGGCCCTTGCAAACGACGTCGTTCACGAGACTTTGAAGGCAAATAGAATCCACATACGAGAACTCAACCAGTTTCTGGTTAATGACTCACGTGTGGAAATAGCTCTTCTTTCTGTGGGTGATGGCCTAACTCTCTGCAGGCGGATTAATTAG 681 43.17 MYCFHIDLQYILEANAYPREHALLKELRETTYAKLDKSQSVMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLATALALPADGQITAIDVDRKAFEIGLPFIKEAAVDHKINFVESQASIALNDLLNDGKEGEFDFAFVDANKSEYIKYHEKLLKLVKIGGVIAYDNTLWFGSVALANDVVHETLKANRIHIRELNQFLVNDSRVEIALLSVGDGLTLCRRIN 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1055316 1059359 + Sed0026308.2 Sed06g0150 716693
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0150 226 PANTHER O-METHYLTRANSFERASE-RELATED 9 225 IPR050362 GO:0008757(PANTHER)
Sed06g0150 226 Pfam O-methyltransferase 16 225 IPR002935 GO:0008171(InterPro)
Sed06g0150 226 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 225 IPR002935 GO:0008171(InterPro)
Sed06g0150 226 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 224 IPR029063 -
Sed06g0150 226 Gene3D Vaccinia Virus protein VP39 7 226 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0148 Sed-Chr6:1045626 Sed06g0150 Sed-Chr6:1055316 2.60E-96 dispersed
Sed06g0150 Sed-Chr6:1055316 Sed06g1745 Sed-Chr6:42150399 1.20E-98 dispersed
Sed06g0149 Sed-Chr6:1055213 Sed06g0150 Sed-Chr6:1055316 4.90E-119 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0150 K00588 - csv:101212121 339.347