Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0163 ATGGCCGAACTGACGACTCTTCCGTCGAGCCCCAACCGAGAAAGTGAGAAGAATGTGCTGCAGAAACACGTGGCGTTCTTTGATAGAAACCAAGACGGCGTCGTTTATCCATGGGAAACCTTCAAAGGCTTTCGAGCAATCGGGGCCGGTTTTCTTCTGTCAGCTGCCGGCGCGGTTTTTATTAACGCTGGACTCAGTTCAAAAACCCGACCGGGAAAATTTCCAAATTTATTGTTCCCAATTGAAATAAAGAACATTAACCTTGCCAAACATGGAAGTGATACTGGTGTATACGATTCTGAGGGAAGGTTTGTTGCTTCAAAGTTTGAACAAATTTTCAAGAAGCATGCATTAACCTATCCCAATGCCTTGACAGAAAAAGAGCTTAAAGACTTGCTCACTGCAAATAAAGAGCCCAAAGACTATTTTGGATGGATTGCTGCAAAGGCAGAATGGACAATTCTATACAGTCTTTGCAAAGATGAGAAAGGATTACTTGAAAAGGAGACTGTGAAAGCAGTTTATGATGGAAGCTTATTTGAACATATGGAGAAAGAGAGAGCTTCAAACAAAAAGAAATGA 582 41.75 MAELTTLPSSPNRESEKNVLQKHVAFFDRNQDGVVYPWETFKGFRAIGAGFLLSAAGAVFINAGLSSKTRPGKFPNLLFPIEIKNINLAKHGSDTGVYDSEGRFVASKFEQIFKKHALTYPNALTEKELKDLLTANKEPKDYFGWIAAKAEWTILYSLCKDEKGLLEKETVKAVYDGSLFEHMEKERASNKKK 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1140655 1144309 + Sed0024976.1 Sed06g0163 716706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0163 193 PANTHER PEROXYGENASE 3-RELATED 12 191 IPR007736 GO:0004497(PANTHER)|GO:0005509(PANTHER)
Sed06g0163 193 Pfam Caleosin related protein 16 183 IPR007736 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2013 Sed-Chr4:34591768 Sed06g0163 Sed-Chr6:1140655 1.00E-36 dispersed
Sed06g0163 Sed-Chr6:1140655 Sed06g0164 Sed-Chr6:1150340 5.50E-84 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0163 K17991 - csv:101213829 311.227