Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0191 ATGGGGTTTAGGGAACTATGGGTGTTGTTGTCTATTATTATGCTTGCAGCTTCAAATGCTGCTTTGGATGAACAGACCTACATTATTCACATGGACACTACAAAGATGGCTACCACAAACCCTGAACAATGGTACACTTCCATGATTGATTCACTCAATCAACTCTCATCTCTTGACGACGACGAAGAAGAAGCATCGAATGCCGCCGAAATTCTTTATGTCTACAAAACTGCATTTTCAGGTTTTGCTGCCAAGCTCTCAACCAAAAAACTTAATTCTTTAAGCAAAAATCCAGGCTTTTTGGCAGCCACTCCTAATAAACTGCTACAACTTCACACAACCCATTCCCCTGAGTTTCTAGGCCTAAAAAAAGACCATGGCCTTTGGAATTCTTCAAACTTAGCTTCTGATGTAATAATTGGTGTCCTTGACACTGGCATTTGGCCTGAACATATAAGCTTTCAAGACAAGGGTCTCCCCCCAGTGCCTACAAAATGGAAAGGCATTTGTCAAGCTGGCCCGAAGTTCTCACGTTCGAATTGCAACAAGAAACTCATCGGCGCACAAGTGTTTATCAAAGGCTATGAGTCCGTCCTTGGTCGGTTGAACGCAACCGGGACGTTTCGATCCGCTCGAGACTCACATGGGCATGGCACACACACGGCTTCCACTGCTGCTGGGAATGTTGTGTACAAAGCAAGCCTTTTTAACCAAGCCATGGGGGAAGCTACCGGAATGAGGTTCACTTCAAGAATTGCAGCATACAAAGTATGCTGGCCTGAGGGGTGCGCGAGCACCGACATTTTGGCAGCCATAGACCGCGCTGTTATGGACGGAGTCGATGTTCTATCGATTTCTTTGGGCGGCGGGGATGGCTTCTTCTACAAAGAAGAAACCGCCATAGCTACATTCGGTGCTGTTCGAAATGGTGTCTTTGTGTCATGTTCAGCTGGTAATTCAGGCCCATACATCTCAACAGTTACAAATGTAGCACCTTGGATCATGACAGTTGCTGCTAGTTACACTGATAGAACATTCCCAACAACTGTAAAACTTGGAAATGGAGAAGTTTTTGAAGGCTCTTCTTTGTATTATGGCAAAAACACAAATCAAATCCCACTTGTTTATAACAAAACTGCTGGTACTGGAGATGAAGCAAATCTTTGTACACCTGGTTCACTTGTTCCATCATTGGTGAAGGGAAAAATTGTCATATGCGAACGAGGATTGAATTCGAGAACGGAGAAAGGCGAGGTAGTGAAATTGGCAGGAGGAGCTGGGATGATTCTAATCAACACACAACTTGAAGGTGAGGAGCTTTTTGCTGATCTTCATGTTTTACCAGCCACAACTCTTGGATTTTCAGATGGGAAGGCCCTCTTAAACTATATAGCTTCCTCGAAACATCAATCGACAGCTTCGATCGCATTCGGAGGGACGAAATACGGAAGTCGAGCGCCGAGAGTTGCTGCGTTTTCTTCTCGAGGGCCGACGTTTTTTCATCCTTATGTGATAAAGCCGGACATAACTGCACCAGGCGTTAATATATTAGCTGCTTGGCCTCACATTGTGAGCCCGACCGAGCTCAAGTCGGACAAAAGAAGAGTGTTATTCAATATCATTTCGGGGACATCTATGTCTTGTCCACACATAAGTGGTATAGCTGCGCTAATTAAGTCGGCTCACAAGAATTGGTCTCCTGCCGCGATTAAGTCTGCGCTCATGACCACGGCTTACGTTACCGACAATAAAAAGAGTCTTATTTCCGACGTTGGGAGCTCTAGTAATAAAAATGCTGACCCTTTTGCGTTTGGTTCGGGGCATGTCAATCCCGAGAGAGCTGTCGACCCAGGATTGGTCTACGATATCGCACCAGAAGACTACCTAAATTACTTGTGTAGCTTGAAATACACTTCTAAACAAGTTGGTTTAGTTTCTAGAGGGAATTTCACATGTCCATCAAAAAGAAGATCAGTTAAGCCAGGGGACTTGAATTACCCTTCATTTTCAGTGTTCATGAAAAAGAAAGCCAAAAATGTTAGTGTAACATTCAAGAGAACAGTGACAAATGTTGGGATCCCAATGAGTGATTACACTGTTAAAATCAACAATCCAAAGGGAATAGAAATTACTGTGAAGCCTATGAAGTTAAGTTTTGGGAAATTGGGAGAGAAATTAAGTTACAAAGTGAGTTTTGTTGCATTGAATGAATCAGAAGACTTTGGTGAGTTTTCTTTTGGATCTATTGTTTGGCTATCTGGAAAATATAATGTGAGAAGTCCTATAGCAGTGACCTGGCAGTAG 2304 43.4 MGFRELWVLLSIIMLAASNAALDEQTYIIHMDTTKMATTNPEQWYTSMIDSLNQLSSLDDDEEEASNAAEILYVYKTAFSGFAAKLSTKKLNSLSKNPGFLAATPNKLLQLHTTHSPEFLGLKKDHGLWNSSNLASDVIIGVLDTGIWPEHISFQDKGLPPVPTKWKGICQAGPKFSRSNCNKKLIGAQVFIKGYESVLGRLNATGTFRSARDSHGHGTHTASTAAGNVVYKASLFNQAMGEATGMRFTSRIAAYKVCWPEGCASTDILAAIDRAVMDGVDVLSISLGGGDGFFYKEETAIATFGAVRNGVFVSCSAGNSGPYISTVTNVAPWIMTVAASYTDRTFPTTVKLGNGEVFEGSSLYYGKNTNQIPLVYNKTAGTGDEANLCTPGSLVPSLVKGKIVICERGLNSRTEKGEVVKLAGGAGMILINTQLEGEELFADLHVLPATTLGFSDGKALLNYIASSKHQSTASIAFGGTKYGSRAPRVAAFSSRGPTFFHPYVIKPDITAPGVNILAAWPHIVSPTELKSDKRRVLFNIISGTSMSCPHISGIAALIKSAHKNWSPAAIKSALMTTAYVTDNKKSLISDVGSSSNKNADPFAFGSGHVNPERAVDPGLVYDIAPEDYLNYLCSLKYTSKQVGLVSRGNFTCPSKRRSVKPGDLNYPSFSVFMKKKAKNVSVTFKRTVTNVGIPMSDYTVKINNPKGIEITVKPMKLSFGKLGEKLSYKVSFVALNESEDFGEFSFGSIVWLSGKYNVRSPIAVTWQ 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1362684 1366687 - Sed0024861.1 Sed06g0191 716734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0191 767 CDD PA_subtilisin_like 349 475 - -
Sed06g0191 767 Pfam Peptidase inhibitor I9 26 112 IPR010259 -
Sed06g0191 767 Pfam PA domain 373 460 IPR003137 -
Sed06g0191 767 SUPERFAMILY PA domain 361 469 IPR046450 -
Sed06g0191 767 Pfam Subtilase family 136 607 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed06g0191 767 Gene3D - 632 766 - -
Sed06g0191 767 FunFam subtilisin-like protease SBT1.5 343 482 - -
Sed06g0191 767 Pfam Fibronectin type-III domain 663 764 IPR041469 -
Sed06g0191 767 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Sed06g0191 767 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Sed06g0191 767 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Sed06g0191 767 FunFam Subtilisin-like protease SBT1.5 632 767 - -
Sed06g0191 767 FunFam Subtilisin-like protease SBT1.5 137 353 - -
Sed06g0191 767 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Sed06g0191 767 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 151 IPR023827 -
Sed06g0191 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 762 IPR045051 -
Sed06g0191 767 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0191 767 CDD Peptidases_S8_3 109 579 IPR034197 -
Sed06g0191 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 112 IPR037045 -
Sed06g0191 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Sed06g0191 767 SUPERFAMILY Subtilisin-like 111 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0191 767 Gene3D - 343 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0191 Sed-Chr6:1362684 Sed06g0193 Sed-Chr6:1416417 0.00E+00 dispersed
Sed10g1236 Sed-Chr10:26478702 Sed06g0191 Sed-Chr6:1362684 4.00E-96 dispersed
Sed06g0191 Sed-Chr6:1362684 Sed06g0192 Sed-Chr6:1399926 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0191 - - - 0.0