Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0193 ATGGGGTTTAGGGAAATATGGGTGTTGTTGTCAATAATGTTTGCAACTTCAATTGCTGCTTTGGATGAACAGACCTACATTATTCACATGGACACTACAAAGATGGCCACAACAAACCCTGAACAATGGTACACATCCATCATCGATTCAGTTAATGAACTCTCATCTCTCGACGACGAAGATGAAGCATCAAACGCCGCGGATATTCTCTACGTCTACAAAACTGCAATTTCAGGTTTTGCTGCCAAGCTCTCAACCAAAAAACTCAATTCTTTAAGCAAAATCGCTGGCTTTCTAGCAGCCACTCCTGATGAACTACTTCAACTTCACACAACCCATTCCCCTGAGTTTCTAGGCCTACAAAAGGACCATGGCCTTTGGAATTCTTCAAACTTGGCTTCTGATGTAATAATTGGTGTTCTTGACACTGGAATTTGGCCTGAACATATAAGCTTTCAAGACAAGGGTCTCCCCCCAGTGCCTACAAAATGGAAAGGCATTTGCCAAACAGGCCCCAAGTTCAAACGTTCGAATTGCAACAAGAAACTCGTCGGCGCAAGAGCCTTCTTTGACGGCTACGAGGCTATCGTTGGTAGATTGAACGAAACTGGAACGTTTCGATCGCCCCGAGACTCGAATGGACATGGCACACACACCGCGTCAACTGCCGCTGGAAATGTCGTGTACAACGCTAACATCTTTAAACAAGGCATGGGGGTAGCGACTGGAATGAGCTTTAGTTCAAGGATTGCTGCATACAAAGTATGTTGGACACTAGGTTGCGCTAGTGCCGACATTTTGGCAGGCATGGACCGAGCAGTCGCCGACGGAGTCGATGTTCTATCGCTCTCTTTAGGTGGCGGTTTCAATCCTTTTTACAAGGACAACATCGCCATAGCTGCATTTGGTGCTGTCCAAAATGGGATTTTTGTGTCATGTTCAGCTGGTAACTTTGGCCCATTGCAATCATTTATTAGTAATGTTGCACCATGGATCATGACCGTTGCTGCTAGCTACACTGATAGAACATTCCCAACAACTGTAAAGCTTGGAAATGGACAAGTTTTTGAAGGCTCTTCTTTGTATTATGGCAAAAACATAAATCAACTCCCACTTGTTTATAACAACACTGCTGGTGGAGATGAAGCAAATTTTTGTACACCTGGTTCACTTGTTCCATCTTTGGTGAAGGGCAAAATTGTAATCTGCGAACGAGGAAAAATCGCGAGAACTGCCAAGGGACAGCAAGTGAAGTTAGCAGGAGGAGCAGGGATGATTATAGTTAACTCGCAACTTGCGGGCGAGGATCTATTCGCCGAACCTCATTTTTTGCCAGCCACGTCTCTAGGAGCTACTGCTAGCAAAGCCCTGCTAGACTATATAGCTTCGTCCAAAAATCAATCGACGGCTTCGATTGCATTCGGAGGGACTAAATATGGAAGTCGAGCGCCCAGTGTTGCTGCGTTTTCTTCTCGAGGACCGAGCATGGTCGGACCCGATGTGATAAAGCCGGATGTAACTGCACCCGGTGTTAACATATTAGCTGCTTGGCCACCCATTGACAGCCCGACTGAGCTCAAGTCGGATAAAAGACGAGTGATTTTCAACATCATTTCAGGAACTTCTATGTCTTGCCCTCATGTTAGTGGATTAGCAGCATTGCTTAAAGCAGCAAACAAAAACTGGTCGCCAGCTGCTATTAAATCTGCCCTCATGACCACAGCTTACACTGTGGACAACAAAATGAGTCCAATTTCCGACGTCGGCTCTCTCAATGGCTCATCCGCGAATCCTTTCGCTTTCGGTTCCGGGCATGTCGATCCAGAGAAAGCATCCGATCCGGGGCTCGTCTACGATATCGCACCCCAAGACTACCTAAACTACTTGTGCAGCTTGAGTAACTACAATTCAACACAAATTGCTATAATTTCAAAAGGGAATTTCACATGTCCATCAAAAAGCAAAACTCTTCAGCCAGGGGACTTGAATTACCCTTCATTCTCAGTGTTCATGAAAAGGAAAGCCAAAAATGGTACAGTTACATTCAAGAGAACAGTGACAAATGTTGGGATCCCAATAAGTGATTACACTGTTAAAATCAACAATCCAAAGGGAATAGAAATTACTGTGAAGCCTATGAAGTTAAGTTTTGGGAAATTGGGAGAGAAATTAAGTTACCAAGTGAGTTTTGTTGCATTGAATGAATCAGAAGATTTTGGTGAGTTTTCTTTTGGATCTATTGTTTGGCTATCTGGAAAATATGTTGTGAGAAGTCCAGTGGCATCAAATACTGATATTCTTGGCTCAAACTCGGGATTGTGGAGTTTAAATGGATTAACACCAAACATGATAACAAATTGCACTACTGACCCTCTGTACATATTTAAAATTTGA 2394 43.78 MGFREIWVLLSIMFATSIAALDEQTYIIHMDTTKMATTNPEQWYTSIIDSVNELSSLDDEDEASNAADILYVYKTAISGFAAKLSTKKLNSLSKIAGFLAATPDELLQLHTTHSPEFLGLQKDHGLWNSSNLASDVIIGVLDTGIWPEHISFQDKGLPPVPTKWKGICQTGPKFKRSNCNKKLVGARAFFDGYEAIVGRLNETGTFRSPRDSNGHGTHTASTAAGNVVYNANIFKQGMGVATGMSFSSRIAAYKVCWTLGCASADILAGMDRAVADGVDVLSLSLGGGFNPFYKDNIAIAAFGAVQNGIFVSCSAGNFGPLQSFISNVAPWIMTVAASYTDRTFPTTVKLGNGQVFEGSSLYYGKNINQLPLVYNNTAGGDEANFCTPGSLVPSLVKGKIVICERGKIARTAKGQQVKLAGGAGMIIVNSQLAGEDLFAEPHFLPATSLGATASKALLDYIASSKNQSTASIAFGGTKYGSRAPSVAAFSSRGPSMVGPDVIKPDVTAPGVNILAAWPPIDSPTELKSDKRRVIFNIISGTSMSCPHVSGLAALLKAANKNWSPAAIKSALMTTAYTVDNKMSPISDVGSLNGSSANPFAFGSGHVDPEKASDPGLVYDIAPQDYLNYLCSLSNYNSTQIAIISKGNFTCPSKSKTLQPGDLNYPSFSVFMKRKAKNGTVTFKRTVTNVGIPISDYTVKINNPKGIEITVKPMKLSFGKLGEKLSYQVSFVALNESEDFGEFSFGSIVWLSGKYVVRSPVASNTDILGSNSGLWSLNGLTPNMITNCTTDPLYIFKI 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1416417 1423258 - Sed0017752.1 Sed06g0193 716736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0193 797 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Sed06g0193 797 ProSiteProfiles Serine proteases, subtilase domain profile. 117 612 - -
Sed06g0193 797 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0193 797 SUPERFAMILY PA domain 393 433 IPR046450 -
Sed06g0193 797 Gene3D - 629 765 - -
Sed06g0193 797 FunFam Subtilisin-like protease SBT1.5 135 352 - -
Sed06g0193 797 Pfam Fibronectin type-III domain 661 761 IPR041469 -
Sed06g0193 797 SUPERFAMILY Subtilisin-like 109 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0193 797 Gene3D - 341 479 - -
Sed06g0193 797 Pfam PA domain 370 457 IPR003137 -
Sed06g0193 797 Pfam Peptidase inhibitor I9 25 110 IPR010259 -
Sed06g0193 797 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 110 IPR037045 -
Sed06g0193 797 FunFam Subtilisin-like protease SBT1.5 629 765 - -
Sed06g0193 797 FunFam subtilisin-like protease SBT1.5 341 479 - -
Sed06g0193 797 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Sed06g0193 797 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Sed06g0193 797 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Sed06g0193 797 CDD Peptidases_S8_3 107 576 IPR034197 -
Sed06g0193 797 Pfam Subtilase family 134 586 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed06g0193 797 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 760 IPR045051 -
Sed06g0193 797 CDD PA_subtilisin_like 347 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0191 Sed-Chr6:1362684 Sed06g0193 Sed-Chr6:1416417 0.00E+00 dispersed
Sed06g0193 Sed-Chr6:1416417 Sed08g0922 Sed-Chr8:7816080 2.10E-190 dispersed
Sed06g0192 Sed-Chr6:1399926 Sed06g0193 Sed-Chr6:1416417 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0193 - - - 0.0