Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0193 | ATGGGGTTTAGGGAAATATGGGTGTTGTTGTCAATAATGTTTGCAACTTCAATTGCTGCTTTGGATGAACAGACCTACATTATTCACATGGACACTACAAAGATGGCCACAACAAACCCTGAACAATGGTACACATCCATCATCGATTCAGTTAATGAACTCTCATCTCTCGACGACGAAGATGAAGCATCAAACGCCGCGGATATTCTCTACGTCTACAAAACTGCAATTTCAGGTTTTGCTGCCAAGCTCTCAACCAAAAAACTCAATTCTTTAAGCAAAATCGCTGGCTTTCTAGCAGCCACTCCTGATGAACTACTTCAACTTCACACAACCCATTCCCCTGAGTTTCTAGGCCTACAAAAGGACCATGGCCTTTGGAATTCTTCAAACTTGGCTTCTGATGTAATAATTGGTGTTCTTGACACTGGAATTTGGCCTGAACATATAAGCTTTCAAGACAAGGGTCTCCCCCCAGTGCCTACAAAATGGAAAGGCATTTGCCAAACAGGCCCCAAGTTCAAACGTTCGAATTGCAACAAGAAACTCGTCGGCGCAAGAGCCTTCTTTGACGGCTACGAGGCTATCGTTGGTAGATTGAACGAAACTGGAACGTTTCGATCGCCCCGAGACTCGAATGGACATGGCACACACACCGCGTCAACTGCCGCTGGAAATGTCGTGTACAACGCTAACATCTTTAAACAAGGCATGGGGGTAGCGACTGGAATGAGCTTTAGTTCAAGGATTGCTGCATACAAAGTATGTTGGACACTAGGTTGCGCTAGTGCCGACATTTTGGCAGGCATGGACCGAGCAGTCGCCGACGGAGTCGATGTTCTATCGCTCTCTTTAGGTGGCGGTTTCAATCCTTTTTACAAGGACAACATCGCCATAGCTGCATTTGGTGCTGTCCAAAATGGGATTTTTGTGTCATGTTCAGCTGGTAACTTTGGCCCATTGCAATCATTTATTAGTAATGTTGCACCATGGATCATGACCGTTGCTGCTAGCTACACTGATAGAACATTCCCAACAACTGTAAAGCTTGGAAATGGACAAGTTTTTGAAGGCTCTTCTTTGTATTATGGCAAAAACATAAATCAACTCCCACTTGTTTATAACAACACTGCTGGTGGAGATGAAGCAAATTTTTGTACACCTGGTTCACTTGTTCCATCTTTGGTGAAGGGCAAAATTGTAATCTGCGAACGAGGAAAAATCGCGAGAACTGCCAAGGGACAGCAAGTGAAGTTAGCAGGAGGAGCAGGGATGATTATAGTTAACTCGCAACTTGCGGGCGAGGATCTATTCGCCGAACCTCATTTTTTGCCAGCCACGTCTCTAGGAGCTACTGCTAGCAAAGCCCTGCTAGACTATATAGCTTCGTCCAAAAATCAATCGACGGCTTCGATTGCATTCGGAGGGACTAAATATGGAAGTCGAGCGCCCAGTGTTGCTGCGTTTTCTTCTCGAGGACCGAGCATGGTCGGACCCGATGTGATAAAGCCGGATGTAACTGCACCCGGTGTTAACATATTAGCTGCTTGGCCACCCATTGACAGCCCGACTGAGCTCAAGTCGGATAAAAGACGAGTGATTTTCAACATCATTTCAGGAACTTCTATGTCTTGCCCTCATGTTAGTGGATTAGCAGCATTGCTTAAAGCAGCAAACAAAAACTGGTCGCCAGCTGCTATTAAATCTGCCCTCATGACCACAGCTTACACTGTGGACAACAAAATGAGTCCAATTTCCGACGTCGGCTCTCTCAATGGCTCATCCGCGAATCCTTTCGCTTTCGGTTCCGGGCATGTCGATCCAGAGAAAGCATCCGATCCGGGGCTCGTCTACGATATCGCACCCCAAGACTACCTAAACTACTTGTGCAGCTTGAGTAACTACAATTCAACACAAATTGCTATAATTTCAAAAGGGAATTTCACATGTCCATCAAAAAGCAAAACTCTTCAGCCAGGGGACTTGAATTACCCTTCATTCTCAGTGTTCATGAAAAGGAAAGCCAAAAATGGTACAGTTACATTCAAGAGAACAGTGACAAATGTTGGGATCCCAATAAGTGATTACACTGTTAAAATCAACAATCCAAAGGGAATAGAAATTACTGTGAAGCCTATGAAGTTAAGTTTTGGGAAATTGGGAGAGAAATTAAGTTACCAAGTGAGTTTTGTTGCATTGAATGAATCAGAAGATTTTGGTGAGTTTTCTTTTGGATCTATTGTTTGGCTATCTGGAAAATATGTTGTGAGAAGTCCAGTGGCATCAAATACTGATATTCTTGGCTCAAACTCGGGATTGTGGAGTTTAAATGGATTAACACCAAACATGATAACAAATTGCACTACTGACCCTCTGTACATATTTAAAATTTGA | 2394 | 43.78 | MGFREIWVLLSIMFATSIAALDEQTYIIHMDTTKMATTNPEQWYTSIIDSVNELSSLDDEDEASNAADILYVYKTAISGFAAKLSTKKLNSLSKIAGFLAATPDELLQLHTTHSPEFLGLQKDHGLWNSSNLASDVIIGVLDTGIWPEHISFQDKGLPPVPTKWKGICQTGPKFKRSNCNKKLVGARAFFDGYEAIVGRLNETGTFRSPRDSNGHGTHTASTAAGNVVYNANIFKQGMGVATGMSFSSRIAAYKVCWTLGCASADILAGMDRAVADGVDVLSLSLGGGFNPFYKDNIAIAAFGAVQNGIFVSCSAGNFGPLQSFISNVAPWIMTVAASYTDRTFPTTVKLGNGQVFEGSSLYYGKNINQLPLVYNNTAGGDEANFCTPGSLVPSLVKGKIVICERGKIARTAKGQQVKLAGGAGMIIVNSQLAGEDLFAEPHFLPATSLGATASKALLDYIASSKNQSTASIAFGGTKYGSRAPSVAAFSSRGPSMVGPDVIKPDVTAPGVNILAAWPPIDSPTELKSDKRRVIFNIISGTSMSCPHVSGLAALLKAANKNWSPAAIKSALMTTAYTVDNKMSPISDVGSLNGSSANPFAFGSGHVDPEKASDPGLVYDIAPQDYLNYLCSLSNYNSTQIAIISKGNFTCPSKSKTLQPGDLNYPSFSVFMKRKAKNGTVTFKRTVTNVGIPISDYTVKINNPKGIEITVKPMKLSFGKLGEKLSYQVSFVALNESEDFGEFSFGSIVWLSGKYVVRSPVASNTDILGSNSGLWSLNGLTPNMITNCTTDPLYIFKI | 797 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1416417 | 1423258 | - | Sed0017752.1 | Sed06g0193 | 716736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0193 | 797 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 540 | 550 | IPR023828 | - | |
Sed06g0193 | 797 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 117 | 612 | - | - | |
Sed06g0193 | 797 | Gene3D | Peptidase S8/S53 domain | 135 | 625 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed06g0193 | 797 | SUPERFAMILY | PA domain | 393 | 433 | IPR046450 | - | |
Sed06g0193 | 797 | Gene3D | - | 629 | 765 | - | - | |
Sed06g0193 | 797 | FunFam | Subtilisin-like protease SBT1.5 | 135 | 352 | - | - | |
Sed06g0193 | 797 | Pfam | Fibronectin type-III domain | 661 | 761 | IPR041469 | - | |
Sed06g0193 | 797 | SUPERFAMILY | Subtilisin-like | 109 | 616 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed06g0193 | 797 | Gene3D | - | 341 | 479 | - | - | |
Sed06g0193 | 797 | Pfam | PA domain | 370 | 457 | IPR003137 | - | |
Sed06g0193 | 797 | Pfam | Peptidase inhibitor I9 | 25 | 110 | IPR010259 | - | |
Sed06g0193 | 797 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 14 | 110 | IPR037045 | - | |
Sed06g0193 | 797 | FunFam | Subtilisin-like protease SBT1.5 | 629 | 765 | - | - | |
Sed06g0193 | 797 | FunFam | subtilisin-like protease SBT1.5 | 341 | 479 | - | - | |
Sed06g0193 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
Sed06g0193 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 539 | 555 | IPR015500 | - | |
Sed06g0193 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Sed06g0193 | 797 | CDD | Peptidases_S8_3 | 107 | 576 | IPR034197 | - | |
Sed06g0193 | 797 | Pfam | Subtilase family | 134 | 586 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed06g0193 | 797 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 25 | 760 | IPR045051 | - | |
Sed06g0193 | 797 | CDD | PA_subtilisin_like | 347 | 472 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g0191 | Sed-Chr6:1362684 | Sed06g0193 | Sed-Chr6:1416417 | 0.00E+00 | dispersed | |
Sed06g0193 | Sed-Chr6:1416417 | Sed08g0922 | Sed-Chr8:7816080 | 2.10E-190 | dispersed | |
Sed06g0192 | Sed-Chr6:1399926 | Sed06g0193 | Sed-Chr6:1416417 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0193 | - | - | - | 0.0 |