Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0198 ATGTCGATACCGAAATCTTCTTGTCTTATCGTCTTTGTTCTTTTCTTCATCGTAGCATGCTTTGCTGCTGTAGAAATCAATGAGAAACATTTCATTGTTTTCTTGGAGAACAACCCTGTTTTAAATGAGGTTGATGCAGCAGAAACACATCTCAATGTTCTTATGTCAGTGAAGGAAAGCCATGTTGAAGCAAAAGAGTCAATGGTCTATAGTTACTCACAAAACTTCAATGCTTTTGCTGCAAAGCTTAGTGAAGAGGAAGCCAAAACATTGTCAAAGAGGGAAGATGTGCATTATGTGATCCAAAACAAGTATAGAGAGCTTCTAACAACAAGATCATGGGACTTCCTTGGATTTCCTTCCAATGCAACAAGAAATACCAAACAAGAGAGTGATATTATTGTTGGTTTATTTGACACAGGGATTGCTCCAACAGCTGATAGTTTTAAAGATGATGGGTTTGGTCCACCACCACAAAAATGGAAAGGCAGCTGTCTCCACTTTGCAAATTTCACTGGCTGCAATAAAAAACTCATCGGAGCAAGATACTTTAAGCTGGACGACATCCCTGATCCCCTCGACATTATTTCGCCGATAGACGTCAATGGTCACGGGACGCATACGTCCTCCACAGCAGCAGGAAATGAAATTTCCGGAGCCAACCTCGGCGGTCTGGCTACTGGAACTGCCCGTGGGGGCGTGCCATCAGCAAGAGTTGCCATGTACAAGGTCTGCTGGGTCAGCACTGGCTGCAGCGATATGGATATTCTCGCCGCCTTCGACGCTGCCATACAGGACGGCGTCGATGTCATTTCGGTATCCATTGCTGGCAATGGCTTCGTCAATTACTCTGAGGACCCAATCTCCATCGGGGCGTTTCGTGCCATGAAGAGTGGCATTATCACTGTGACCGCTGCAGGCAATGCCGGTCCGAGTGCCGGGAGCGTTATCAACCACGCGCCATGGATCGTGACGGTTGCTGCCAGTTCGATTGATCGGAATTTTATCAGCCCATTGGAGTTGGGCAATGGGAACAACATCTCTGGAGTAGGAATAAACTTATTGAATCTACAACAAAAAATGTACCCTTTGGTGAGTGGAGGCGATGCAGCAAGGAACCAAGAGAGTGTGGACGGTGCAAGTTTCTGCGATGAGGGCTCAATTGATCCAACCAAAGTCAAAGACAAAATTGTGATGTGTAAAGTTATGGCTAAGGGAGCTGATTCTATTGTTAAATCACTTGGTGCTAGTGGTGCCATTCTTCAAAGTGATCAGTTTCTTGATGTTACCAATATCTACATGGCTCCTGCTTCCATGGTTAGTAGCTTCGTCGGTGCTTCAATCGATAACTACATCAAATCCACAAGAACACCAACGGCAATGATATACAAATCAAGACAACTCGAAGCCGCAGCTCCAATCGTGGCTTCCTTCTCTTCTAGAGGCCCAAATTCAGGCTCCAAACGTATTTTAAAGCCGGACATAGCAGCGCCGGGAGTGAACATATTGGCAGCATACACACCATTGAAGTCACTGACGGGGCTAAAGGGTGATACCCAATTCTCTAAATTCACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCATGCCGCCGCGGCCGCCGCCTACGTCAAATCTTTCCACCCTCTTTGGTCGCCCGCCGCCATTCGATCCGCCTTGATCACCACCGCGACTCCAAGTAGTCGACGACTAAACCCCGATGCAGAATTTGCATATGGTGCGGGCAACTTAAATCCAGCTAGAGCCAAGAACCCCGGTCTAGTCTACGATGCAAATGAGATGTCGTACATCCAATTCCTTTGCAGCGAAGGCTACAACGGGTCAGCTATTTCCATCCTTACAGGAACCAAATCCATAGACTGCTCCACTCTAGTCCCGGGCCAAAGCCACGACTCTCTCAATTACCCAACCTTTCAACTCAGTCTCAATAACAGCCAACTGCCAACGACTGTTGTGTTCGGGCGCGAAGTCACCAATGTTGGTGACCCCGTCGTAGTTTACAACGCCACCATCACGGCTCCCCCTGGGGTTGAGATCACAGTGGAACCAAGGAGTATGTCGTTCTCCCGATTGCTGGAGAAGCAGAGCTTTAAGGTTGTTGTGAAGGCCAGTCCTTTGTCGGCCGGGAAAATGGTGTCGGGTTCGCTTGCTTGGTTTGATGGTCGACATGTCGTGAAAAGTCCGATTGTTGTTTATAGTCCATGA 2226 47.75 MSIPKSSCLIVFVLFFIVACFAAVEINEKHFIVFLENNPVLNEVDAAETHLNVLMSVKESHVEAKESMVYSYSQNFNAFAAKLSEEEAKTLSKREDVHYVIQNKYRELLTTRSWDFLGFPSNATRNTKQESDIIVGLFDTGIAPTADSFKDDGFGPPPQKWKGSCLHFANFTGCNKKLIGARYFKLDDIPDPLDIISPIDVNGHGTHTSSTAAGNEISGANLGGLATGTARGGVPSARVAMYKVCWVSTGCSDMDILAAFDAAIQDGVDVISVSIAGNGFVNYSEDPISIGAFRAMKSGIITVTAAGNAGPSAGSVINHAPWIVTVAASSIDRNFISPLELGNGNNISGVGINLLNLQQKMYPLVSGGDAARNQESVDGASFCDEGSIDPTKVKDKIVMCKVMAKGADSIVKSLGASGAILQSDQFLDVTNIYMAPASMVSSFVGASIDNYIKSTRTPTAMIYKSRQLEAAAPIVASFSSRGPNSGSKRILKPDIAAPGVNILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHAAAAAAYVKSFHPLWSPAAIRSALITTATPSSRRLNPDAEFAYGAGNLNPARAKNPGLVYDANEMSYIQFLCSEGYNGSAISILTGTKSIDCSTLVPGQSHDSLNYPTFQLSLNNSQLPTTVVFGREVTNVGDPVVVYNATITAPPGVEITVEPRSMSFSRLLEKQSFKVVVKASPLSAGKMVSGSLAWFDGRHVVKSPIVVYSP 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1489775 1499406 - Sed0020013.1 Sed06g0198 716741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0198 741 Gene3D - 607 740 - -
Sed06g0198 741 Gene3D - 332 468 - -
Sed06g0198 741 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Sed06g0198 741 Pfam Fibronectin type-III domain 640 738 IPR041469 -
Sed06g0198 741 Gene3D Peptidase S8/S53 domain 132 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0198 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 108 IPR037045 -
Sed06g0198 741 CDD Peptidases_S8_3 107 565 IPR034197 -
Sed06g0198 741 SUPERFAMILY Protease propeptides/inhibitors 29 106 - -
Sed06g0198 741 SUPERFAMILY Subtilisin-like 126 591 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0198 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Sed06g0198 741 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Sed06g0198 741 Pfam Subtilase family 131 582 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed06g0198 741 ProSiteProfiles Serine proteases, subtilase domain profile. 113 590 - -
Sed06g0198 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 736 IPR045051 -
Sed06g0198 741 FunFam Subtilisin-like protease SBT1.5 132 339 - -
Sed06g0198 741 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Sed06g0198 741 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Sed06g0198 741 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Sed06g0198 741 CDD PA_subtilisin_like 339 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0198 Sed-Chr6:1489775 Sed06g0200 Sed-Chr6:1500298 2.10E-304 dispersed
Sed06g0198 Sed-Chr6:1489775 Sed06g0199 Sed-Chr6:1500298 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0198 - - - 0.0