Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0199 ATGTCAACAGTTATTCGACGTGCTCTTACTATGTCGATGTCGATATCGATATCTTCTAGTCTTCTCGTCTTTGTTCTTATCTTTGTCCTAGGATGCGTTGCTGGGATAGAAATGGATGAGGAAAAGAAACATTTCATTGTTTTTCTGGAGAACAAACCTGTTTTAAATGAGGTTGATGCAGTAGAAACACATCTCAATGTTCTCATGTCAGTGAAAGATAGCTATGTAGAGGCAAAAGAGTCAATGGTGTATAGTTACACAAAAAGCTTCAATGCTTTTGCTGCCAAACTTACCAAAGAGGAAGCCAAAACATTATCAAAGAGGGAGGATGTGCATCATGTGGTACCAAACAAGTATAGAAAGCTTCAAACTTCAAGATCATGGGATTTCATTGGATTGCCTTCCAATGCAAGAAGAAACACCAAACAAGAGAGTGATATTATTGTTGGTTTATTTGATAGTGGAATCACTCCTACGGCGGAGAGCTTTAAAGATAATGGGTTTGGTCCTCCACCCAAAAAATGGAGTGGCACCTGTCACCACTTTGCCAATTTCACTGCCTGCAACAAGAAACTCATAGGAGCAAGATATTTCAAGCTCGACGGCAATGACGATCCCGCCGACGTCTTATCACCGATAGATGTCGATGGTCACGGCACACACACGTCATCAACAGCAACCGGCAATGCAGTAGCCGGAGCCGGCCTCTTTGACCTAGCCAAAGGAACAGCCCGAGGCGGTGTACCATCGGCTAGAGTAGCCATGTACAAAGTGTGCTGGGCTAGCACCGGGTGCGCTGATATGGATATTTTGGCTGCCTACGAGGCTGCCATACAAGATGGCGTCGATGTTATTTCGATATCGATTGGAGGTGGAAGCTTGGGCAATTACTCAGAGGACTCGATCTCCATCGGCGCATTCCATGCCATGAAGAAGGGCATTGTCACCGTGACCTCTGGTGGCAACAGCGGTCCGAGTGCTGGGACCGTTGTCAACCACGCACCGTGGATTGTGACCGTTGCCGCCAGTACTATTGATCGGAAATTTATCAGCCCATTGGAACTCGGCAATGGGAAAAATATCTCTGGAATAGGGATAAACACATTCAATCCAAAGCAAAAAATGTACCCTTTAGTGAGAGGAGGGGATGTGGCAAAGAGCTCAGACACCAAAGACAGTGCAAGTTATTGTGAAGAAGATTCCATTGATCCAAAGAAGGTCAAAGGCAGCCTTGTGTTCTGCAAATTGATGAGTTGGGGAGCTGATTCTGTGGTGAAATCACTTGGTGCTAATGGTGTTATCATTCAAACTGATCAGTTTCTTGACAATGCTGAGATCTTCATGGCTCCTGCCACCGAGGTCAGTAGCATTGTTGGTGCTACTATTAACTCTTACATCAAGTCCACCAGAACACCAATGGCCGTGATATACAGAACAAGACAACTCAAAGCAACAGCTCCAATGGCGGCTTCCTTTTCATCCAGAGGTCCAAATCCAGGCTCGAACCGTATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCGGCATACACACCATTGAAGTCACTGACGGGGCTGAAGGGGGATACTCAATTCTCAAAGTTCACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCTGCGGCCGCGGCGTACGTCAAGTCTTTCCATCCCCGCTGGTCTCCGGCCGCCATTCGATCCGCCTTGATCACCACCGCGAGACCGATTAGTCGACGATTGAACCCCGATGGCGAATTCGCGTATGGTGCGGGCAATTTAAATCCATCGAGGGCAAAAAACCCCGGCCTAATCTACGACCTCAACGAAATGTCCTTTGTTCAATTCCTCTGCCATGAAGGTTACACTGGATCTTCAATCGCAGTCCTTACTGGAACCAAACCTATAAACTGCTCAACTCTAATCCCGGGCCAAGGCCATGACTCTCTCAATTACCCAACCATGCAACTCACTCTCAAAAGCCCCAAACGATCAATGACAGTCGTGTTTCGACGACAAGTCACCAATGTCGGCCACCCCGTCTCAGTGTACAATGCCACCGTCCGAGCTCCCCGCGGGGTGGAGATCACGGTGATGCCGAGGACTCTGTCGTTTTCGCGCGTACTACAAAAGCGTAGCTTTCAGGTTGCGGTGAAGGCGGGTCCTTTGCCCTCGTCGAAAATGGTGTCCGGTTCGCTTGCTTGGGTTGGTGCTGGACATGTTGTGAGAAGTCCTATTGTTGTTCATAGACCATAA 2268 48.19 MSTVIRRALTMSMSISISSSLLVFVLIFVLGCVAGIEMDEEKKHFIVFLENKPVLNEVDAVETHLNVLMSVKDSYVEAKESMVYSYTKSFNAFAAKLTKEEAKTLSKREDVHHVVPNKYRKLQTSRSWDFIGLPSNARRNTKQESDIIVGLFDSGITPTAESFKDNGFGPPPKKWSGTCHHFANFTACNKKLIGARYFKLDGNDDPADVLSPIDVDGHGTHTSSTATGNAVAGAGLFDLAKGTARGGVPSARVAMYKVCWASTGCADMDILAAYEAAIQDGVDVISISIGGGSLGNYSEDSISIGAFHAMKKGIVTVTSGGNSGPSAGTVVNHAPWIVTVAASTIDRKFISPLELGNGKNISGIGINTFNPKQKMYPLVRGGDVAKSSDTKDSASYCEEDSIDPKKVKGSLVFCKLMSWGADSVVKSLGANGVIIQTDQFLDNAEIFMAPATEVSSIVGATINSYIKSTRTPMAVIYRTRQLKATAPMAASFSSRGPNPGSNRILKPDIAAPGVDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPRWSPAAIRSALITTARPISRRLNPDGEFAYGAGNLNPSRAKNPGLIYDLNEMSFVQFLCHEGYTGSSIAVLTGTKPINCSTLIPGQGHDSLNYPTMQLTLKSPKRSMTVVFRRQVTNVGHPVSVYNATVRAPRGVEITVMPRTLSFSRVLQKRSFQVAVKAGPLPSSKMVSGSLAWVGAGHVVRSPIVVHRP 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1500298 1511386 - Sed0019836.1 Sed06g0199 716742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0199 755 Pfam Peptidase inhibitor I9 45 123 IPR010259 -
Sed06g0199 755 Pfam Subtilase family 145 594 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed06g0199 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 70 751 IPR045051 -
Sed06g0199 755 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Sed06g0199 755 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Sed06g0199 755 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Sed06g0199 755 Gene3D Peptidase S8/S53 domain 146 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0199 755 CDD PA_subtilisin_like 353 476 - -
Sed06g0199 755 CDD Peptidases_S8_3 121 578 IPR034197 -
Sed06g0199 755 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Sed06g0199 755 ProSiteProfiles Serine proteases, subtilase domain profile. 127 604 - -
Sed06g0199 755 Gene3D - 621 754 - -
Sed06g0199 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 123 IPR037045 -
Sed06g0199 755 Pfam Fibronectin type-III domain 654 752 IPR041469 -
Sed06g0199 755 SUPERFAMILY Subtilisin-like 122 608 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0199 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Sed06g0199 755 Gene3D - 346 482 - -
Sed06g0199 755 FunFam Subtilisin-like protease SBT1.5 146 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0549 Sed-Chr2:43058682 Sed06g0199 Sed-Chr6:1500298 1.20E-171 dispersed
Sed06g0199 Sed-Chr6:1500298 Sed10g1120 Sed-Chr10:12871406 2.10E-187 dispersed
Sed06g0198 Sed-Chr6:1489775 Sed06g0199 Sed-Chr6:1500298 0.00E+00 tandem
Sed06g0199 Sed-Chr6:1500298 Sed06g0200 Sed-Chr6:1500298 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0199 - - - 0.0