Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0200 ATGGTGTATAGTTACACAAAAAGCTTCAATGCTTTTGCTGCCAAACTTACCAAAGAGGAAGCCAAAACATTATCAAAGAGGGAGGATGTGCATCATGTGGTACCAAACAAGTATAGAAAGCTTCAAACTTCAAGATCATGGGATTTCATTGGATTGCCTTCCAATGCAAGAAGAAACACCAAACAAGAGAGTGATATTATTGTTGGTTTATTTGATAGTGGAATCACTCCTACGGCGGAGAGCTTTAAAGATAATGGGTTTGGTCCTCCACCCAAAAAATGGAGTGGCACCTGTCACCACTTTGCCAATTTCACTGCCTGCAACAAGAAACTCATAGGAGCAAGATATTTCAAGCTCGACGGCAATGACGATCCCGCCGACGTCTTATCACCGATAGATGTCGATGGTCACGGCACACACACGTCATCAACAGCAACCGGCAATGCAGTAGCCGGAGCCGGCCTCTTTGACCTAGCCAAAGGAACAGCCCGAGGCGGTGTACCATCGGCTAGAGTAGCCATGTACAAAGTGTGCTGGGCTAGCACCGGGTGCGCTGATATGGATATTTTGGCTGCCTACGAGGCTGCCATACAAGATGGCGTCGATGTTATTTCGATATCGATTGGAGGTGGAAGCTTGGGCAATTACTCAGAGGACTCGATCTCCATCGGCGCATTCCATGCCATGAAGAAGGGCATTGTCACCGTGACCTCTGGTGGCAACAGCGGTCCGAGTGCTGGGACCGTTGTCAACCACGCACCGTGGATTGTGACCGTTGCCGCCAGTACTATTGATCGGAAATTTATCAGCCCATTGGAACTCGGCAATGGGAAAAATATCTCTGGAATAGGGATAAACACATTCAATCCAAAGCAAAAAATGTACCCTTTAGTGAGAGGAGGGGATGTGGCAAAGAGCTCAGACACCAAAGACAGTGCAAGTTATTGTGAAGAAGATTCCATTGATCCAAAGAAGGTCAAAGGCAGCCTTGTGTTCTGCAAATTGATGAGTTGGGGAGCTGATTCTGTGGTGAAATCACTTGGTGCTAATGGTGTTATCATTCAAACTGATCAGTTTCTTGACAATGCTGAGATCTTCATGGCTCCTGCCACCGAGGTCAGTAGCATTGTTGGTGCTACTATTAACTCTTACATCAAGTCCACCAGAACACCAATGGCCGTGATATACAGAACAAGACAACTCAAAGCAACAGCTCCAATGGCGGCTTCCTTTTCATCCAGAGGTCCAAATCCAGGCTCGAACCGTATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCGGCATACACACCATTGAAGTCACTGACGGGGCTGAAGGGGGATACTCAATTCTCAAAGTTCACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCTGCGGCCGCGGCGTACGTCAAGTCTTTCCATCCCCGCTGGTCTCCGGCCGCCATTCGATCCGCCTTGATCACCACCGCGAGACCGATTAGTCGACGATTGAACCCCGATGGCGAATTCGCGTATGGTGCGGGCAATTTAAATCCATCGAGGGCAAAAAACCCCGGCCTAATCTACGACCTCAACGAAATGTCCTTTGTTCAATTCCTCTGCCATGAAGGTTACACTGGATCTTCAATCGCAGTCCTTACTGGAACCAAACCTATAAACTGCTCAACTCTAATCCCGGGCCAAGGCCATGACTCTCTCAATTACCCAACCATGCAACTCACTCTCAAAAGCCCCAAACGATCAATGACAGTCGTGTTTCGACGACAAGTCACCAATGTCGGCCACCCCGTCTCAGTGTACAATGCCACCGTCCGAGCTCCCCGCGGGGTGGAGATCACGGTGATGCCGAGGACTCTGTCGTTTTCGCGCGTACTACAAAAGCGTAGCTTTCAGGTTGCGGTGAAGGCGGGTCCTTTGCCCTCGTCGAAAATGGTGTCCGGTTCGCTTGCTTGGGTTGGTGCTGGACATGTTGTGAGAAGTCCTATTGTTGTTCATAGACCATAA 2025 49.43 MVYSYTKSFNAFAAKLTKEEAKTLSKREDVHHVVPNKYRKLQTSRSWDFIGLPSNARRNTKQESDIIVGLFDSGITPTAESFKDNGFGPPPKKWSGTCHHFANFTACNKKLIGARYFKLDGNDDPADVLSPIDVDGHGTHTSSTATGNAVAGAGLFDLAKGTARGGVPSARVAMYKVCWASTGCADMDILAAYEAAIQDGVDVISISIGGGSLGNYSEDSISIGAFHAMKKGIVTVTSGGNSGPSAGTVVNHAPWIVTVAASTIDRKFISPLELGNGKNISGIGINTFNPKQKMYPLVRGGDVAKSSDTKDSASYCEEDSIDPKKVKGSLVFCKLMSWGADSVVKSLGANGVIIQTDQFLDNAEIFMAPATEVSSIVGATINSYIKSTRTPMAVIYRTRQLKATAPMAASFSSRGPNPGSNRILKPDIAAPGVDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPRWSPAAIRSALITTARPISRRLNPDGEFAYGAGNLNPSRAKNPGLIYDLNEMSFVQFLCHEGYTGSSIAVLTGTKPINCSTLIPGQGHDSLNYPTMQLTLKSPKRSMTVVFRRQVTNVGHPVSVYNATVRAPRGVEITVMPRTLSFSRVLQKRSFQVAVKAGPLPSSKMVSGSLAWVGAGHVVRSPIVVHRP 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1500298 1510120 - Sed0019836.2 Sed06g0200 716743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0200 674 CDD Peptidases_S8_3 40 497 IPR034197 -
Sed06g0200 674 ProSitePatterns Serine proteases, subtilase family, serine active site. 462 472 IPR023828 -
Sed06g0200 674 FunFam Subtilisin-like protease SBT1.5 65 274 - -
Sed06g0200 674 Gene3D - 540 673 - -
Sed06g0200 674 ProSiteProfiles Serine proteases, subtilase domain profile. 46 523 - -
Sed06g0200 674 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Sed06g0200 674 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 670 IPR045051 -
Sed06g0200 674 Gene3D Peptidase S8/S53 domain 65 533 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed06g0200 674 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Sed06g0200 674 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Sed06g0200 674 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Sed06g0200 674 Pfam Subtilase family 64 513 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed06g0200 674 Gene3D - 265 401 - -
Sed06g0200 674 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Sed06g0200 674 CDD PA_subtilisin_like 272 395 - -
Sed06g0200 674 Pfam Fibronectin type-III domain 573 671 IPR041469 -
Sed06g0200 674 SUPERFAMILY Subtilisin-like 41 527 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0198 Sed-Chr6:1489775 Sed06g0200 Sed-Chr6:1500298 2.10E-304 dispersed
Sed06g0200 Sed-Chr6:1500298 Sed10g1120 Sed-Chr10:12871406 8.10E-183 dispersed
Sed06g0199 Sed-Chr6:1500298 Sed06g0200 Sed-Chr6:1500298 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0200 - - - 0.0