Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0444 | ATGGGGAAGAACGAATTTCTAACCCCAAAAGCGATCGCAAACAGAATCAAGGCAAAAGGGCTCCAAAAGCTCAGATGGTATTGCCAGATGTGTCAAAAGCAATGCCGAGATGAGAATGGATTTAAATGTCACTGTATGAGCGAAAGCCACCAGCGCCAAATGCAGATCTTTGGCCAAAACCCCCATCGGATTGTCGAAGGTTATACCGAAGAGTTCGAGAAATCTTTCATGGAGCACGTTAAGCGCAGCCATCGGTTTAGTCGCGTGGCGGCTACCGTGGTGTACAATGAGTATATTAACGATAGACATCATATTCATATGAATTCTACCGAGTGGGCTACTCTCACTGAGTTTGTGAAGCATTTGGGTCGAACTGGGCAGTGTAAGGTGGAGGAGACTCCCAAGGGTTGGTTCATTACTTACATCGATAGGGACTCGGAGACGGTTTTTAAGGAGAGAATGAAAAATAAGAGGATAAGGGCAGATTTAGCTGAAGAAGAGAAGCAAGAGAGAGAGATAAAGAGGCAAATTGAGAGAGCTGAGCAATTAGCTCCTTTGGGTCCTGTACCTGCTGAGCCTTTGGAGGTTGAGAAGTCGAAAGAGTTGAAATTGGAGAGTGGGGTTAAGCTCGGATTTGCTCTAGGAACAACATCAAAATTGAAGGAGAAAGGACAGAGTTCCATGGCGGTTTTTGACGAGGATGAGACCGACGAGATTGCCAATGGGAAACCAAAACATGGTGAGGCTTCCAAAAACAAGGTGGGTGGTGGTGGTTTGTCAGCTTTGGAAGCAATGATGAGAGAAGAAGAGATGAAGAAGGAGAAGATAAATAGGAGGGATTACTGGCTCTATGAGGGAATAATTGTGAAGGTCATGAGCAAGAATTTGGTTGAGAAAGGTTACTATAAACAAAAGGGAGTCGTGCGAAAAGTGATCGATAAATATGTTGGAGAGATCGAAATGCTCGATGTAAAGCATGTGTTGAGAGTTGATCAAGAAGAACTAGAAACAGTGATACCACAAATTGGTGGCTTAGTAAAGATAGTGAATGGGGCGTATCGGGGATCGAATGCTAGGTTATTGGGCATTGATACCGAAAAGTTTTGTGCTAAAGTGCAAATCGAAAAGGGTTTGTACGATGGCCGGGTGCTTAAGGCTGTTGAATATGAAGATATCAGTAAACTTGCATCATAA | 1194 | 43.8 | MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYTEEFEKSFMEHVKRSHRFSRVAATVVYNEYINDRHHIHMNSTEWATLTEFVKHLGRTGQCKVEETPKGWFITYIDRDSETVFKERMKNKRIRADLAEEEKQEREIKRQIERAEQLAPLGPVPAEPLEVEKSKELKLESGVKLGFALGTTSKLKEKGQSSMAVFDEDETDEIANGKPKHGEASKNKVGGGGLSALEAMMREEEMKKEKINRRDYWLYEGIIVKVMSKNLVEKGYYKQKGVVRKVIDKYVGEIEMLDVKHVLRVDQEELETVIPQIGGLVKIVNGAYRGSNARLLGIDTEKFCAKVQIEKGLYDGRVLKAVEYEDISKLAS | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3930189 | 3932016 | - | Sed0019448.1 | Sed06g0444 | 716987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0444 | 397 | Coils | Coil | 259 | 279 | - | - | |
Sed06g0444 | 397 | CDD | KOW_KIN17 | 342 | 395 | IPR041995 | - | |
Sed06g0444 | 397 | PANTHER | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG | 1 | 396 | IPR037321 | GO:0003690(PANTHER)|GO:0005634(PANTHER)|GO:0006260(PANTHER)|GO:0006974(PANTHER) | |
Sed06g0444 | 397 | SMART | Kin17_mid_2 | 52 | 178 | IPR019447 | - | |
Sed06g0444 | 397 | Pfam | KN17 SH3-like C-terminal domain | 278 | 331 | IPR041330 | - | |
Sed06g0444 | 397 | SUPERFAMILY | beta-beta-alpha zinc fingers | 26 | 66 | IPR036236 | - | |
Sed06g0444 | 397 | Pfam | Domain of Kin17 curved DNA-binding protein | 52 | 177 | IPR019447 | - | |
Sed06g0444 | 397 | Gene3D | - | 60 | 159 | IPR038254 | - | |
Sed06g0444 | 397 | FunFam | DNA/RNA-binding protein kin17-like | 286 | 339 | - | - | |
Sed06g0444 | 397 | Gene3D | - | 286 | 339 | - | - | |
Sed06g0444 | 397 | Coils | Coil | 154 | 183 | - | - | |
Sed06g0444 | 397 | FunFam | DNA/RNA-binding protein KIN17, putative | 340 | 396 | - | - | |
Sed06g0444 | 397 | Gene3D | - | 340 | 396 | IPR014722 | - | |
Sed06g0444 | 397 | FunFam | DNA/RNA-binding protein KIN17, putative | 61 | 160 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0444 | K13102 | - | csv:101216499 | 667.922 |