Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0469 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCACCGTTTGCAGAATCTGATCCAATCCCCACTCGACGAATCCAGCCCCTTCGGCGTCACATCTCGCCCCGAAGAAACCGTCGCCTCCGCCAATCCCCTGTTCGCCGACGGCGTTGCCACGAAGGATATCCACATCGATTCGTTCACGTCTCTTGGCATTCGGATCTTCCTCCCTGAATCTGCTCTCGCCCCAATTGAACCCCATTCCAAACCCTCCTCGAGATCGGCCAGGGCTAAACCTAAACGCGCGAATCTCGACTCTTCTCCGCCCGATCTGAACAATTTGCAGCAGTTTCCGTCTCGCCGGAATAGCTATGGCTCTCCCGGGAATTCGAGGGAGGAGTTTCGGACGAGTCGATTTGGGGGTTATAGTAATGAGATGGAGGGGCTGAATTTGATTCCCGGCCCTGCTCCCGGCGGTGTTTACAGGGGATATGCGCCCGGGACGGAGAATAGCCGGCGGTTGCCGGTGATGTTGCAGTTTCACGGCGGGGGTTGGGTTGGTGGGAGTAATGATTCCGCGGCGAACGATTTCTTTTGTCGGCGGATTGCGAAATTGTGTGATGTTATTGTTGTGGCGGTTGGGTATCGGCTTGCGCCTGAGAATCGGTTTCCGGCTGCGTTTGAAGATGGATTGAAGGTTTTGAACTGGCTGGGGAAGCAGGCTAATTTGGCTGAGTGTAGCAAGTCTATGGGGAGTAGTAGAAGCAATGGCAATGAGTTTAAGAAATCGGATAATCATCGGCAAATTGTTGACGCGTTCGGAGCGTCGATGGTAGAGCCTTGGTTGGCAGCTCATGGAGACCCATCAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATATTGCGGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTCGTTGCACAGGTTCTCCTTTATCCATTCTTCGTCGGGAGTGTCCCCACACATTCAGAACTAAAGTTGGCGAATTCATACTTTTACGATAAAGCTATGTGCCTGCTTGCTTGGAAACTGTTCCTACCCGAGGAAGAGTTTAGTCTTGATCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGCCCACCTTTAAAGCTCATGCCACCAACACTGACAGTGGTGGCTGAACTTGACTGGATGAGAGACCGAGCAATAGCTTACTCTGAAGAACTTCGAAAAGTAAACGTCGATGCGCCTGTTCTTGACTACAAGGATGCAGTACACGAATTCGCTACCCTAGACATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATTTGGGTCCAAAAACATATTTCACTACGAGGCCATGAATTCTCTTATTGA 1407 51.31 MPSVAVKLYSVFFKFLLKHRLQNLIQSPLDESSPFGVTSRPEETVASANPLFADGVATKDIHIDSFTSLGIRIFLPESALAPIEPHSKPSSRSARAKPKRANLDSSPPDLNNLQQFPSRRNSYGSPGNSREEFRTSRFGGYSNEMEGLNLIPGPAPGGVYRGYAPGTENSRRLPVMLQFHGGGWVGGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGSSRSNGNEFKKSDNHRQIVDAFGASMVEPWLAAHGDPSRCVLLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVQKHISLRGHEFSY 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4109690 4114182 + Sed0005830.1 Sed06g0469 717012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0469 468 PANTHER ARYLACETAMIDE DEACETYLASE 47 437 IPR050466 -
Sed06g0469 468 SUPERFAMILY alpha/beta-Hydrolases 160 459 IPR029058 -
Sed06g0469 468 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 176 192 IPR002168 GO:0016787(InterPro)
Sed06g0469 468 MobiDBLite consensus disorder prediction 82 135 - -
Sed06g0469 468 MobiDBLite consensus disorder prediction 105 135 - -
Sed06g0469 468 Gene3D alpha/beta hydrolase 33 465 IPR029058 -
Sed06g0469 468 Pfam alpha/beta hydrolase fold 176 433 IPR013094 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0469 Sed-Chr6:4109690 Sed08g1815 Sed-Chr8:32915325 4.80E-25 dispersed
Sed06g0469 Sed-Chr6:4109690 Sed08g1459 Sed-Chr8:29158285 4.10E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0469 - - - 0.0