Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0473 | ATGGGAAGGCGATCCGTATGGATTGCTCTTCTCGTCCTCTCTCTTCTTCTTTCCTTGCGAACACAGCCAGTTTCTTCCACTCTTCCGCTTCAATCATCGAATCAGGGTTCTAAAGAATCTACCACTGAGAGTACTCCAAAGCAGGATCGGGACAATGCTCATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATCTAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAGGCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTTAGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTTTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTGCTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACGGCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCATTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAGGGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGAAGAAAGAAAAAACCTTCATAG | 840 | 43.81 | MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4136623 | 4141284 | - | Sed0026914.1 | Sed06g0473 | 717016 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0473 | 279 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 136 | IPR013087 | - | |
Sed06g0473 | 279 | MobiDBLite | consensus disorder prediction | 26 | 42 | - | - | |
Sed06g0473 | 279 | MobiDBLite | consensus disorder prediction | 26 | 56 | - | - | |
Sed06g0473 | 279 | PANTHER | ZINC FINGER PROTEIN-RELATED | 7 | 279 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g0473 | Sed-Chr6:4136623 | Sed06g0475 | Sed-Chr6:4136623 | 1.70E-139 | dispersed | |
Sed06g0473 | Sed-Chr6:4136623 | Sed06g0474 | Sed-Chr6:4136623 | 3.70E-121 | tandem | |
Sed06g0473 | Sed-Chr6:4136623 | Sed08g1454 | Sed-Chr8:29134933 | 1.50E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0473 | - | - | - | 0.0 |