Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0473 ATGGGAAGGCGATCCGTATGGATTGCTCTTCTCGTCCTCTCTCTTCTTCTTTCCTTGCGAACACAGCCAGTTTCTTCCACTCTTCCGCTTCAATCATCGAATCAGGGTTCTAAAGAATCTACCACTGAGAGTACTCCAAAGCAGGATCGGGACAATGCTCATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATCTAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAGGCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTTAGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTTTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTGCTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACGGCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCATTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAGGGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGAAGAAAGAAAAAACCTTCATAG 840 43.81 MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4136623 4141284 - Sed0026914.1 Sed06g0473 717016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0473 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Sed06g0473 279 MobiDBLite consensus disorder prediction 26 42 - -
Sed06g0473 279 MobiDBLite consensus disorder prediction 26 56 - -
Sed06g0473 279 PANTHER ZINC FINGER PROTEIN-RELATED 7 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0473 Sed-Chr6:4136623 Sed06g0475 Sed-Chr6:4136623 1.70E-139 dispersed
Sed06g0473 Sed-Chr6:4136623 Sed06g0474 Sed-Chr6:4136623 3.70E-121 tandem
Sed06g0473 Sed-Chr6:4136623 Sed08g1454 Sed-Chr8:29134933 1.50E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0473 - - - 0.0