Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0476 ATGCTATGGTGTGTTTTATTACCTTATGATGATAATAAAATTTGGACTTTGGAGTTGATGTTCAGTACTCCAAAGCAGGATCGGGACAATGCTCATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATCTAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAGGCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTTAGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTTTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTGCTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACGGCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCATTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAGGGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGAAGAAAGAAAAAACCTTCATAG 774 42.12 MLWCVLLPYDDNKIWTLELMFSTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS 257
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 4136623 4141284 - Sed0026914.4 Sed06g0476 717019
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0476 257 ProSitePatterns Zinc finger C2H2 type domain signature. 93 114 IPR013087 -
Sed06g0476 257 PANTHER ZINC FINGER PROTEIN-RELATED 25 257 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0474 Sed-Chr6:4136623 Sed06g0476 Sed-Chr6:4136623 1.60E-121 dispersed
Sed06g0476 Sed-Chr6:4136623 Sed08g1454 Sed-Chr8:29134933 1.40E-122 dispersed
Sed06g0475 Sed-Chr6:4136623 Sed06g0476 Sed-Chr6:4136623 3.90E-154 tandem
Sed06g0476 Sed-Chr6:4136623 Sed06g0477 Sed-Chr6:4136623 3.40E-121 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0476 - - - 0.0