Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed06g0476 | ATGCTATGGTGTGTTTTATTACCTTATGATGATAATAAAATTTGGACTTTGGAGTTGATGTTCAGTACTCCAAAGCAGGATCGGGACAATGCTCATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATCTAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAGGCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTTAGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTTTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTGCTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACGGCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCATTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAGGGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGAAGAAAGAAAAAACCTTCATAG | 774 | 42.12 | MLWCVLLPYDDNKIWTLELMFSTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4136623 | 4141284 | - | Sed0026914.4 | Sed06g0476 | 717019 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed06g0476 | 257 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 114 | IPR013087 | - | |
| Sed06g0476 | 257 | PANTHER | ZINC FINGER PROTEIN-RELATED | 25 | 257 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed06g0474 | Sed-Chr6:4136623 | Sed06g0476 | Sed-Chr6:4136623 | 1.60E-121 | dispersed | |
| Sed06g0476 | Sed-Chr6:4136623 | Sed08g1454 | Sed-Chr8:29134933 | 1.40E-122 | dispersed | |
| Sed06g0475 | Sed-Chr6:4136623 | Sed06g0476 | Sed-Chr6:4136623 | 3.90E-154 | tandem | |
| Sed06g0476 | Sed-Chr6:4136623 | Sed06g0477 | Sed-Chr6:4136623 | 3.40E-121 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed06g0476 | - | - | - | 0.0 |