Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0573 ATGGTGATTGGTGATGGTGTTCTTACCCCTGCTATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAATTTTCCATGGCCAAAGAACACCATCGCTATGTTGAAGTCCCGGTTGCTTGTGCTATATTGGTATTCCTGTTTGCACTTCAGCATTACGGAACCCATCGAGTCGGATTTCTGTTTGCACCAGTTGTAATTACCTGGCTCCTGTGTATCAGTGGCATAGGGTTGTACAATATTTTCTACTGGAATCCCCATGTCTTCCAAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCCTCGGCGGGATCCTGTTATGTATGACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCCAGATTGCTTTCTCTTTTTTGGTTTATCCATCATTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCACGGACAAGCTGACCATCGAATCGGATTTTACGTGTCTGTTCCTGAGAAAATAAGATGGCCCGTAATGGTGATCGCCATTTTAGCTGCAGTAGTTGGAAGTCAAGCTGTCATTACCGGGACCTTCTCAATAATAAAACAGTGCTCTGCATTAGGCTGCTTCCCAAGGGTCAAAATCGTTCATACGTCCTCGAAAATCCACGGCCAGATTTATATACCGGAGATCAACTGGACGTTGATGATCTTATGCTTGGCTATTACCTGTGGCTTTCGAGACACGAAGCGATTGGGAAATGCATCTGGTTTAGCAGTGATAACCGTAATGCTGGTAACTACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGCTTTCTCTTTGCCATTGCCTTCATGCTCATTTTTGGGTCCATCGAATCACTCTACTTCTCAGCATCTCTCATAAAGTTTCGAGAAGGAGCCTGGGTTCCCATCGCGCTCTCATTCATCTTCCTATTAGTCATGTATGTATGGCATTACGGAACGCGCAAGAAATACGAGTTCGACGTACAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGTCCCGGCTTAGGCATCGTACGAGTACGTGGCATCGGCCTCATATACACGGAGCTCGTCTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACGAACCTCCCCGCCTTCCACGAGGTCCTGGTCTTCCTCTGCATAAAATCCGTCCCTGTCCCACACGTGAGACCTGGGGAGAGATTTCTCGTAGGAAGAGTCGGGCCAAAAGAGTTCCGTCTCTACCGATGCATAGCAAGATACGGGTACCGCGACATCCACAAGGACGACATGGAGTTCGAGAAGGACCTGGTGTGCAGCATTGCAGAGTTCATCCGGTCGGAGGAGGGGGAGACGAGCGTGAAGGTAGAGGCCGACGAGGAAGAGAGCGAGAGAATGAGGGTGGTGGGGACAAGCTCAACACATGTAGATGGAGTGAGGATGTGTGAGGATGAAGGAGGAGAGAGAGGAGAAACATCAGAGGTGAGAGAGATAAAGTCACCACAAAAGCTTAGAAAAAGAGTGAGGTTTCTTGTACCTGAGAGCCCAAAAATGGATGTTGAATCAAGGAAAGAGCTGCAAGAGCTAATGGAAGCAAGAGAGGCAGGAATGGCTTTCATAATGGGACATTCATATGTCAAAGCAAACAGAGGGTCAGGTTGGGTCAAGAAAATGGTCATAAATTATGGGTATGATTTTTTGAGAAGGAACTCAAGAGGGCCAAGCTATGCTTGGACTGTGCCTCATGCATCTACTTTAGAAGTGGGGATGATCTACCAAGTTTGA 1833 47.19 MVIGDGVLTPAISVFSAVSGLEFSMAKEHHRYVEVPVACAILVFLFALQHYGTHRVGFLFAPVVITWLLCISGIGLYNIFYWNPHVFQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIQIAFSFLVYPSLVLAYMGQAAYLSQHHGQADHRIGFYVSVPEKIRWPVMVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMILCLAITCGFRDTKRLGNASGLAVITVMLVTTCLMSVVIILCWHKSFLFAIAFMLIFGSIESLYFSASLIKFREGAWVPIALSFIFLLVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPGLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHEVLVFLCIKSVPVPHVRPGERFLVGRVGPKEFRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEEGETSVKVEADEEESERMRVVGTSSTHVDGVRMCEDEGGERGETSEVREIKSPQKLRKRVRFLVPESPKMDVESRKELQELMEAREAGMAFIMGHSYVKANRGSGWVKKMVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5021405 5026833 + Sed0001793.2 Sed06g0573 717116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0573 610 NCBIfam potassium uptake protein 1 610 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed06g0573 610 Pfam K+ potassium transporter C-terminal domain 369 609 IPR053952 -
Sed06g0573 610 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 610 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed06g0573 610 Pfam K+ potassium transporter integral membrane domain 1 355 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0573 Sed-Chr6:5021405 Sed11g1933 Sed-Chr11:33739172 8.70E-285 dispersed
Sed06g0572 Sed-Chr6:5021405 Sed06g0573 Sed-Chr6:5021405 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0573 K03549 - csv:101211664 1136.71