Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0585 ATGGCGATTCTGAAACTCTTCTTCATTGTTCTCTCAACGGCGATGTTTTTGTCCTCATCGGAATCTTCCCCACTCACGGCGGACTATTACCGGAATTCCTGCCCGAGATTCAGCCAGATCATCCAGGAAACCGTCACCAACAAGCAGATCACAAGCCCCTCCACCGCCGCCGGAACCCTCCGCCTTCTCCTCCATGACTGCCTCCCCAACGGCTGCGACGCCTCCGTCCTCATCTCCTCCACTCCCTTCAACAGAGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACGTCGTCGTCCGAGCCAAAACCGCTCTCGAGCTCGCGTGTCCGAACACCGTCTCCTGCGCCGACATTCTCGCCGCCGCCACTCGCGACCTCGTCACCATGGTCGGCGGACCTTACTACACCGTCCTCCTCGGCCGCCGCGACGGCCGCGTGTCGCTGTCGTCGGCGATTCCCGGATCTCTCCCGATGCCGTCGTCGTCGATGTCGCAGATCATCGACATCTTCAAATCTCGAGGGTTTACTGTCCAAGAAATGGTAGCGCTGAGCGGCGCTCACACGATTGGATTCTCGCATTGTAAGGAATTCAGTTCTCAGATCTATAATTATAGCAAATCGTCTTCGTTCGACACTTCGTATAACCCTAGATTAGCGCAAGGATTACAGAAAGCTTGTTCTGGATTTGAGAAGAATCCTACATTGTCGGTTTTCAATGATATTATGACTCCAAACAAGTTTGATAACTCTTACTTCCAGAATCTGCCCAAGGGATTGGGGATCTTGAAGTCCGATCATGGATTGTATAACGACTGGAGGACGAAGCCGTTCGTGGAGGCGTATGCGGCGGATGGGAGCAAATTCTTCCAAGATTTTGCTAGAGCTATGGAGAAGTTGAGTAATCATAATGTTATGACAGGGTATCAAGGGGAGATTCGACATCGGTGTGATGCTATCAATTGA 981 53.21 MAILKLFFIVLSTAMFLSSSESSPLTADYYRNSCPRFSQIIQETVTNKQITSPSTAAGTLRLLLHDCLPNGCDASVLISSTPFNRAERDADINLSLPGDAFDVVVRAKTALELACPNTVSCADILAAATRDLVTMVGGPYYTVLLGRRDGRVSLSSAIPGSLPMPSSSMSQIIDIFKSRGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSFDTSYNPRLAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYNDWRTKPFVEAYAADGSKFFQDFARAMEKLSNHNVMTGYQGEIRHRCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5125060 5126985 + Sed0011820.1 Sed06g0585 717128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0585 326 Gene3D - 28 326 - -
Sed06g0585 326 Pfam Peroxidase 42 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed06g0585 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 FunFam Peroxidase 163 305 - -
Sed06g0585 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 PANTHER - 8 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed06g0585 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Sed06g0585 326 FunFam Peroxidase 28 169 - -
Sed06g0585 326 Gene3D Peroxidase, domain 2 163 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0585 Sed-Chr6:5125060 Sed08g2534 Sed-Chr8:38049478 1.20E-102 dispersed
Sed06g0585 Sed-Chr6:5125060 Sed08g1372 Sed-Chr8:28302487 4.40E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0585 K00430 - csv:101219829 560.836