Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed06g0635 | ATGGAGATAGAATGGAAATGGATGGTGGGGATGTGGTTGGTGGTTTATTCAGGATGGAGGATTTTGAATTGGATTTGGGTGAACCCTAAGCGGCTTGAAACCTGCCTGAGACAGCAAGGCCTCGCCGGAAACCCTTACCGCCTTCTCTTCGGTGATTCCAAAGACATCGCCGCCGCCGTCCGCCGTGCCAGAACTCACTCCATGCCTTTCTCTCATGATATTGCCTCACGCGCCACCCCTACGTCCAATGTTACTATCAACAAATACGGTAAGCATTCATTCACATGGGTTGGCACAACTCCAAGAGTTTATATTACTGAGCCTGAACAAGTGAAGATTGTTTTCTCTCAAATTAATGATATTCGTAAGACATCTTCTCTTCCCTTTAGAAGAAAAAAAGGAACAGGTGGAATTGTCTCTCTCGAGGGACCTAAATGGGTTATGCATAGAAAGATCATCAACCCTGCATTTCACATGGAAAAGTTGAAGGTAATGTTTCCAGCATTCTCCAAGAGCTGTAACGAGATAGTTAACAAATGGGAAATGGCGATCTCTGAAAAGGGGAGTTGTGAAATAGATGTGTTTCCAGATTTGCAAAATATGGCTGCGGATGTGATTTCTCGAACTGCATTTGGAAGTAGCTATGAGGAAGGAAAAAAGATTTTCCAACTTTTGAAACAATGGGTTGTGCTGTTGATGACTTGCGTAATGAAAAAAGTTTATTACATTCCAGGGTGGAGGCTTGTACCAACTAAGTTAAGCAAGGAAATGGATCAGATTGATGATAAAATAAAAGATATGGTTGGGGATATTGTAAGCAAAAGACAAAATGTTACGAGGGCAGGTGAAACTCCCAATGATGATCTGCTAGGAATCCTTTTAGAATCAAATTCAAATCAAATTCAAGAACACAAAAACAAGAAAGATGTGGGAATGAGTTTCGAAGAAGTAATTAATGAATGCAGGCTTTTCTATTTTGCTGGCCAAGAAACCACAGCTACATTGCTTGCTTGGACAATGATTCTACTTGGTCGATACTCTGAGTGGCAAGATCGAGCACGAGCAGAAGTCCTTGAAGTTTTTGGTCATGATAAGAAATTGGATTTTGATGGCCTAAGTCGTCTTAAAATAGTCAATATGATACTAAACGAGGTTCTAAGGCTATACCCTCCAGTTGGTATGCTAGCTCGAGAGATTCACAATGAAACAAAGCTAGGGAATCTGACATTACCAGTTGGAGTTACAATAGGCATTCCAATTGTATGCATCCACCAAGACACTAAAATATGGGGAGAGGATGCGAGCGAGTTCAAACCAGAAAGATTTTCGGAAGGGATTTCGAAAGCAACAAACAATCAATTAGGGTTCCTTCCTTTCGGATGGGGTCCTCGAATCTGTCTTGGGCAAAACTTTGCTATGATTGAAGCAAAGATAGCAATATCCATGATTTTGCAGCGATTCTCTTTCCAACTTTCTCCATCTTATACTCATGCTCCTGTCACAAACATCACTATTCAGCCACAACATGGAGCCCATCTAATCCTTCGTAAGCTATAA | 1557 | 41.3 | MEIEWKWMVGMWLVVYSGWRILNWIWVNPKRLETCLRQQGLAGNPYRLLFGDSKDIAAAVRRARTHSMPFSHDIASRATPTSNVTINKYGKHSFTWVGTTPRVYITEPEQVKIVFSQINDIRKTSSLPFRRKKGTGGIVSLEGPKWVMHRKIINPAFHMEKLKVMFPAFSKSCNEIVNKWEMAISEKGSCEIDVFPDLQNMAADVISRTAFGSSYEEGKKIFQLLKQWVVLLMTCVMKKVYYIPGWRLVPTKLSKEMDQIDDKIKDMVGDIVSKRQNVTRAGETPNDDLLGILLESNSNQIQEHKNKKDVGMSFEEVINECRLFYFAGQETTATLLAWTMILLGRYSEWQDRARAEVLEVFGHDKKLDFDGLSRLKIVNMILNEVLRLYPPVGMLAREIHNETKLGNLTLPVGVTIGIPIVCIHQDTKIWGEDASEFKPERFSEGISKATNNQLGFLPFGWGPRICLGQNFAMIEAKIAISMILQRFSFQLSPSYTHAPVTNITIQPQHGAHLILRKL | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5988054 | 5994439 | + | Sed0017708.1 | Sed06g0635 | 717178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed06g0635 | 518 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed06g0635 | 518 | SUPERFAMILY | Cytochrome P450 | 86 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | Gene3D | Cytochrome P450 | 77 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | Pfam | Cytochrome P450 | 87 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 86 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 201 | 219 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0635 | 518 | FunFam | Cytochrome P450 734A1 | 26 | 518 | - | - | |
| Sed06g0635 | 518 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 511 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed06g0632 | Sed-Chr6:5927922 | Sed06g0635 | Sed-Chr6:5988054 | 8.00E-171 | dispersed | |
| Sed06g0635 | Sed-Chr6:5988054 | Sed06g0670 | Sed-Chr6:6309800 | 3.80E-180 | dispersed | |
| Sed06g0634 | Sed-Chr6:5959128 | Sed06g0635 | Sed-Chr6:5988054 | 6.10E-271 | tandem | |
| Sed06g0635 | Sed-Chr6:5988054 | Sed06g0636 | Sed-Chr6:5988054 | 8.10E-207 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed06g0635 | - | - | - | 0.0 |