Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed06g0636 | ATGATATTGCCTCACGCGCCACCCCTACGTCCAATGTTACTATCAACAAATACGGTAATGTTTCCAGCATTCTCCAAGAGCTGTAACGAGATAGTTAACAAATGGGAAATGGCGATCTCTGAAAAGGGGAGTTGTGAAATAGATGTGTTTCCAGATTTGCAAAATATGGCTGCGGATGTGATTTCTCGAACTGCATTTGGAAGTAGCTATGAGGAAGGAAAAAAGATTTTCCAACTTTTGAAACAATGGGTTGTGCTGTTGATGACTTGCGTAATGAAAAAAGTTTATTACATTCCAGGGTGGAGGCTTGTACCAACTAAGTTAAGCAAGGAAATGGATCAGATTGATGATAAAATAAAAGATATGGTTGGGGATATTGTAAGCAAAAGACAAAATGTTACGAGGGCAGGTGAAACTCCCAATGATGATCTGCTAGGAATCCTTTTAGAATCAAATTCAAATCAAATTCAAGAACACAAAAACAAGAAAGATGTGGGAATGAGTTTCGAAGAAGTAATTAATGAATGCAGGCTTTTCTATTTTGCTGGCCAAGAAACCACAGCTACATTGCTTGCTTGGACAATGATTCTACTTGGTCGATACTCTGAGTGGCAAGATCGAGCACGAGCAGAAGTCCTTGAAGTTTTTGGTCATGATAAGAAATTGGATTTTGATGGCCTAAGTCGTCTTAAAATAGTCAATATGATACTAAACGAGGTTCTAAGGCTATACCCTCCAGTTGGTATGCTAGCTCGAGAGATTCACAATGAAACAAAGCTAGGGAATCTGACATTACCAGTTGGAGTTACAATAGGCATTCCAATTGTATGCATCCACCAAGACACTAAAATATGGGGAGAGGATGCGAGCGAGTTCAAACCAGAAAGATTTTCGGAAGGGATTTCGAAAGCAACAAACAATCAATTAGGGTTCCTTCCTTTCGGATGGGGTCCTCGAATCTGTCTTGGGCAAAACTTTGCTATGATTGAAGCAAAGATAGCAATATCCATGATTTTGCAGCGATTCTCTTTCCAACTTTCTCCATCTTATACTCATGCTCCTGTCACAAACATCACTATTCAGCCACAACATGGAGCCCATCTAATCCTTCGTAAGCTATAA | 1122 | 39.66 | MILPHAPPLRPMLLSTNTVMFPAFSKSCNEIVNKWEMAISEKGSCEIDVFPDLQNMAADVISRTAFGSSYEEGKKIFQLLKQWVVLLMTCVMKKVYYIPGWRLVPTKLSKEMDQIDDKIKDMVGDIVSKRQNVTRAGETPNDDLLGILLESNSNQIQEHKNKKDVGMSFEEVINECRLFYFAGQETTATLLAWTMILLGRYSEWQDRARAEVLEVFGHDKKLDFDGLSRLKIVNMILNEVLRLYPPVGMLAREIHNETKLGNLTLPVGVTIGIPIVCIHQDTKIWGEDASEFKPERFSEGISKATNNQLGFLPFGWGPRICLGQNFAMIEAKIAISMILQRFSFQLSPSYTHAPVTNITIQPQHGAHLILRKL | 373 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5988054 | 5994439 | + | Sed0017708.2 | Sed06g0636 | 717179 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 171 | 188 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 191 | 217 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 321 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 56 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 234 | 252 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | E-class P450 group I signature | 311 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | Gene3D | Cytochrome P450 | 7 | 373 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 314 | 323 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed06g0636 | 373 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 366 | IPR050665 | GO:0004497(PANTHER) | |
| Sed06g0636 | 373 | PRINTS | P450 superfamily signature | 312 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | P450 superfamily signature | 182 | 199 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | P450 superfamily signature | 235 | 246 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | PRINTS | P450 superfamily signature | 321 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | SUPERFAMILY | Cytochrome P450 | 19 | 371 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed06g0636 | 373 | Pfam | Cytochrome P450 | 19 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed06g0634 | Sed-Chr6:5959128 | Sed06g0636 | Sed-Chr6:5988054 | 6.10E-178 | dispersed | |
| Sed06g0636 | Sed-Chr6:5988054 | Sed06g0670 | Sed-Chr6:6309800 | 5.20E-131 | dispersed | |
| Sed06g0635 | Sed-Chr6:5988054 | Sed06g0636 | Sed-Chr6:5988054 | 8.10E-207 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed06g0636 | - | - | - | 0.0 |