Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0670 ATGGATGTTAGGATTTCAATTTGGATAGTAATTTTGATTTGTTTGCTGCGATGGGGATGGAAAATTTTGAACTGGGTTTGGTTGAGGCCGAAGAAGCTGGAGAAGTGCCTTCGACGGCAAGGCTTCGCCGGAAATTCTTACCGGCTTTTCTCCGGCGACTTGAACGACAGAGCCGCCATGATGCAACGCGCCCAATCCAATCCCATGAACTTCTCCCATGATATCGCTCCACGAGTCATCCCCTCTATTCATCATACCATCCACAAATATGGGAAGAATTCATTCATGTGGCTTGGGCCCTATCCAAGAGTGAACATCCTGGACCCTGAACAATTCAAAGCTGCCTTTTCTCTGGTCTATGATGTTCCAAAGCCAAGTTTCAACCCTCTTGTCAAGTTTCTTTTGGATGGACTTGCTAGTCATGAAGGAGCCAAATGGGCTAAACATAGGAAGATAATCAACCCTGCATTTCATTTTGAAAGGTTGAAGGACATGGTGCCAAAAATGTTTGAGAGTTGCAATGAGTTGATTGGAAAATGGGAAAGAATGATCTCAAGAGAAGGATTTTGTGAATTGGACGTGATGCCTCATTTGCAAACTCTAGCAGCTGATGTCATTTCTCGAGCAGCATTTGGAAGTAGCTATCAAGAAGGACAAATTATCTTTCAACATCTAAAAGAATTGACTATAATGATCCTTGAAGCTGTCTCTGTAGTTTACATACCAGGATGGAGGTTTTTACCAACCAAGTCAAACAATAGAATGAATAAGATGCGTAAAGAAATAAAAGCAATGCTCTTGTCTGTTATCAACAAAAGACAAAGGGCAATGAAGGCAGGTGAAACTATACAAACTGATGTGTTAACCATTCTCTTAGAATCAAATTTCAACGAAATTCGAGAAAACGGAAACAACGATAAGGTTGGAATGACCATAGAAGACGTGGTCGAAGAATGTAAGCTTTTCTACTTTGCTGGCCAAGAAACCACAGCAATGTTACTGGTTTGGACCATGATTTTGTTGGGTTCATCTTCAAAATGGCAAGATCGAGCAAGAGCAGAGGTTCTCCAAGTCTTTGGCAACAACAAACCAGATTTTGATGGTTTAAATCGCCTAAAAGTTGTTGCTATGATTCTGAACGAGGTTCTCAGATTATATCCACCGGGAGGAGCGTTTAGTCGCGTTGTTCAAAAGGAAACAAAGCTTGGGAACGTGACATTACCAGCTGGAGTGATGTTGAGTTTCCCAATTGTTCTTATCCATAGAGATCAAGAGCTATGGGGAGAAGATGCAAATGAGTTCAATCCAGAAAGATTTGCAGAGGGAATTTCAAAAGCAACAATTAATAATCAAATTGGGTTCTTCCCATTTGGATGGGGTCCAAGAATATGCATTGGACAAAATTTTTCAATGATTGAGGCCAAAATGGCATTATCTATGATCCTACAAAACTTCTCATTTGAACTTTCTTCATCCTACACTCATGCTCCTGTATCCATTTTCACCATTCAACCTCAGCATGGAGCTCATATCATTCTGCATAAACTTTAG 1551 40.68 MDVRISIWIVILICLLRWGWKILNWVWLRPKKLEKCLRRQGFAGNSYRLFSGDLNDRAAMMQRAQSNPMNFSHDIAPRVIPSIHHTIHKYGKNSFMWLGPYPRVNILDPEQFKAAFSLVYDVPKPSFNPLVKFLLDGLASHEGAKWAKHRKIINPAFHFERLKDMVPKMFESCNELIGKWERMISREGFCELDVMPHLQTLAADVISRAAFGSSYQEGQIIFQHLKELTIMILEAVSVVYIPGWRFLPTKSNNRMNKMRKEIKAMLLSVINKRQRAMKAGETIQTDVLTILLESNFNEIRENGNNDKVGMTIEDVVEECKLFYFAGQETTAMLLVWTMILLGSSSKWQDRARAEVLQVFGNNKPDFDGLNRLKVVAMILNEVLRLYPPGGAFSRVVQKETKLGNVTLPAGVMLSFPIVLIHRDQELWGEDANEFNPERFAEGISKATINNQIGFFPFGWGPRICIGQNFSMIEAKMALSMILQNFSFELSSSYTHAPVSIFTIQPQHGAHIILHKL 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6309800 6315286 - Sed0022198.1 Sed06g0670 717213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0670 516 FunFam Cytochrome P450 734A1 27 516 - -
Sed06g0670 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 508 IPR050665 GO:0004497(PANTHER)
Sed06g0670 516 CDD CYP72 80 512 - -
Sed06g0670 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 Pfam Cytochrome P450 87 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 SUPERFAMILY Cytochrome P450 76 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 Gene3D Cytochrome P450 70 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0670 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2515 Sed-Chr4:38080325 Sed06g0670 Sed-Chr6:6309800 5.10E-209 dispersed
Sed04g2516 Sed-Chr4:38088584 Sed06g0670 Sed-Chr6:6309800 1.00E-214 dispersed
Sed06g0635 Sed-Chr6:5988054 Sed06g0670 Sed-Chr6:6309800 3.80E-180 dispersed
Sed06g0636 Sed-Chr6:5988054 Sed06g0670 Sed-Chr6:6309800 5.20E-131 dispersed
Sed06g0670 Sed-Chr6:6309800 Sed07g2034 Sed-Chr7:35352470 3.20E-110 dispersed
Sed06g0670 Sed-Chr6:6309800 Sed06g0671 Sed-Chr6:6309800 4.20E-248 tandem
Sed12g1720 Sed-Chr12:28384951 Sed06g0670 Sed-Chr6:6309800 7.10E-139 transposed
Sed06g0670 Sed-Chr6:6309800 Sed08g1277 Sed-Chr8:26536540 2.50E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0670 - - - 0.0