Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0671 ATGTGGCTTGGGCCCTATCCAAGAGTGAACATCCTGGACCCTGAACAATTCAAAGCTGCCTTTTCTCTGGTCTATGATGTTCCAAAGCCAAGTTTCAACCCTCTTGTCAAGTTTCTTTTGGATGGACTTGCTAGTCATGAAGGAGCCAAATGGGCTAAACATAGGAAGATAATCAACCCTGCATTTCATTTTGAAAGGTTGAAGGACATGGTGCCAAAAATGTTTGAGAGTTGCAATGAGTTGATTGGAAAATGGGAAAGAATGATCTCAAGAGAAGGATTTTGTGAATTGGACGTGATGCCTCATTTGCAAACTCTAGCAGCTGATGTCATTTCTCGAGCAGCATTTGGAAGTAGCTATCAAGAAGGACAAATTATCTTTCAACATCTAAAAGAATTGACTATAATGATCCTTGAAGCTGTCTCTGTAGTTTACATACCAGGATGGAGGTTTTTACCAACCAAGTCAAACAATAGAATGAATAAGATGCGTAAAGAAATAAAAGCAATGCTCTTGTCTGTTATCAACAAAAGACAAAGGGCAATGAAGGCAGGTGAAACTATACAAACTGATGTGTTAACCATTCTCTTAGAATCAAATTTCAACGAAATTCGAGAAAACGGAAACAACGATAAGGTTGGAATGACCATAGAAGACGTGGTCGAAGAATGTAAGCTTTTCTACTTTGCTGGCCAAGAAACCACAGCAATGTTACTGGTTTGGACCATGATTTTGTTGGGTTCATCTTCAAAATGGCAAGATCGAGCAAGAGCAGAGGTTCTCCAAGTCTTTGGCAACAACAAACCAGATTTTGATGGTTTAAATCGCCTAAAAGTTGTTGCTATGATTCTGAACGAGGTTCTCAGATTATATCCACCGGGAGGAGCGTTTAGTCGCGTTGTTCAAAAGGAAACAAAGCTTGGGAACGTGACATTACCAGCTGGAGTGATGTTGAGTTTCCCAATTGTTCTTATCCATAGAGATCAAGAGCTATGGGGAGAAGATGCAAATGAGTTCAATCCAGAAAGATTTGCAGAGGGAATTTCAAAAGCAACAATTAATAATCAAATTGGGTTCTTCCCATTTGGATGGGGTCCAAGAATATGCATTGGACAAAATTTTTCAATGATTGAGGCCAAAATGGCATTATCTATGATCCTACAAAACTTCTCATTTGAACTTTCTTCATCCTACACTCATGCTCCTGTATCCATTTTCACCATTCAACCTCAGCATGGAGCTCATATCATTCTGCATAAACTTTAG 1266 39.26 MWLGPYPRVNILDPEQFKAAFSLVYDVPKPSFNPLVKFLLDGLASHEGAKWAKHRKIINPAFHFERLKDMVPKMFESCNELIGKWERMISREGFCELDVMPHLQTLAADVISRAAFGSSYQEGQIIFQHLKELTIMILEAVSVVYIPGWRFLPTKSNNRMNKMRKEIKAMLLSVINKRQRAMKAGETIQTDVLTILLESNFNEIRENGNNDKVGMTIEDVVEECKLFYFAGQETTAMLLVWTMILLGSSSKWQDRARAEVLQVFGNNKPDFDGLNRLKVVAMILNEVLRLYPPGGAFSRVVQKETKLGNVTLPAGVMLSFPIVLIHRDQELWGEDANEFNPERFAEGISKATINNQIGFFPFGWGPRICIGQNFSMIEAKMALSMILQNFSFELSSSYTHAPVSIFTIQPQHGAHIILHKL 421
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 6309800 6315286 - Sed0022198.2 Sed06g0671 717214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0671 421 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 413 IPR050665 GO:0004497(PANTHER)
Sed06g0671 421 Gene3D Cytochrome P450 1 420 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS P450 superfamily signature 230 247 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS P450 superfamily signature 360 369 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 SUPERFAMILY Cytochrome P450 1 419 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 Pfam Cytochrome P450 1 396 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 362 371 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 359 369 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 322 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 239 265 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 106 124 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 219 236 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g0671 421 PRINTS E-class P450 group I signature 369 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0671 Sed-Chr6:6309800 Sed12g1720 Sed-Chr12:28384951 4.80E-125 dispersed
Sed06g0670 Sed-Chr6:6309800 Sed06g0671 Sed-Chr6:6309800 4.20E-248 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0671 - - - 0.0