Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0682 ATGGAAAATTCCTCCCAATCGGCGCCTGATCGGAAAACCCGTTTCTACCACCCCTACCAAGACCTCCACATTCCGATCACCAACCTCTACGAGCTCCCCACCTCGCCGGAGCATCTCTTCTTCGAGGAAGCCGCCAGGCCCCACCGCTCCTGGGGCGAAAACCTCCAATACTACACCGGAATCGGCTACCTCTCCGGCGCCATCCTCGGCGGCGCCCGGGGCTCTCTCCAGGGCCTCCGCGCCGCCGACCCCGGCGATTCCCTCAAGCTCCGCCTCAATCGGGTCCTCAACTCCGGCGGCCACATCGGCCGCCGGGCTGGGAACTCGCTTGGGATCCTCGGCTTGATTTTCGCCGGTTTGGAAAGTGGGGTCGTTCAATTGAGAGGCTCTGATGATGTTTTGAATAGTGTTGTTGCTGGATTGGGGACGGGTGCTCTTTATAAGGCCGCTTCCGGGCCGCGATCCGCCGCTATTGCCGGCGCCATTGGCGGGATTGCTGCTGCTGCTGCTGTTGCGGGTAAGCAGGCTGTGAAGAGATATGTGCCAATTTAG 552 61.05 MENSSQSAPDRKTRFYHPYQDLHIPITNLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSLQGLRAADPGDSLKLRLNRVLNSGGHIGRRAGNSLGILGLIFAGLESGVVQLRGSDDVLNSVVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6474295 6475349 + Sed0008580.1 Sed06g0682 717225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0682 183 PANTHER TIM23 32 170 IPR045238 GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER)
Sed06g0682 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0795 Sed-Chr4:6637170 Sed06g0682 Sed-Chr6:6474295 8.90E-50 dispersed
Sed06g0682 Sed-Chr6:6474295 Sed09g1672 Sed-Chr9:40110053 4.90E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0682 K17794 - csv:116401801 309.686