Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g0682 | ATGGAAAATTCCTCCCAATCGGCGCCTGATCGGAAAACCCGTTTCTACCACCCCTACCAAGACCTCCACATTCCGATCACCAACCTCTACGAGCTCCCCACCTCGCCGGAGCATCTCTTCTTCGAGGAAGCCGCCAGGCCCCACCGCTCCTGGGGCGAAAACCTCCAATACTACACCGGAATCGGCTACCTCTCCGGCGCCATCCTCGGCGGCGCCCGGGGCTCTCTCCAGGGCCTCCGCGCCGCCGACCCCGGCGATTCCCTCAAGCTCCGCCTCAATCGGGTCCTCAACTCCGGCGGCCACATCGGCCGCCGGGCTGGGAACTCGCTTGGGATCCTCGGCTTGATTTTCGCCGGTTTGGAAAGTGGGGTCGTTCAATTGAGAGGCTCTGATGATGTTTTGAATAGTGTTGTTGCTGGATTGGGGACGGGTGCTCTTTATAAGGCCGCTTCCGGGCCGCGATCCGCCGCTATTGCCGGCGCCATTGGCGGGATTGCTGCTGCTGCTGCTGTTGCGGGTAAGCAGGCTGTGAAGAGATATGTGCCAATTTAG | 552 | 61.05 | MENSSQSAPDRKTRFYHPYQDLHIPITNLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSLQGLRAADPGDSLKLRLNRVLNSGGHIGRRAGNSLGILGLIFAGLESGVVQLRGSDDVLNSVVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI | 183 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6474295 | 6475349 | + | Sed0008580.1 | Sed06g0682 | 717225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g0682 | 183 | PANTHER | TIM23 | 32 | 170 | IPR045238 | GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER) | |
Sed06g0682 | 183 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 57 | 166 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0795 | Sed-Chr4:6637170 | Sed06g0682 | Sed-Chr6:6474295 | 8.90E-50 | dispersed | |
Sed06g0682 | Sed-Chr6:6474295 | Sed09g1672 | Sed-Chr9:40110053 | 4.90E-50 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g0682 | K17794 | - | csv:116401801 | 309.686 |