Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0863 ATGGCGGATGCTAAGCCCAGCCATGCTTCTGCAACTGCTACCCTCCTACTCGCTTTCGTCTTCCTCGCTGTTGCGGACGAGACGATATCCTACACACCCATCGACAACATAGTCGTCGACTGTGGTTCCACTCAAAACTCAACTCTGCCGGACAACCGCCTGTGGCTCCAAGATGTGGACTCCAAATTCTTCCCTTCCGATCTCCGTCAGAACCGCATGTCCTTACCAGCGGACACGCAGTCCTCTCCGGTCCCCGACGCACCGTACCGAACAGCACGGCTGTCCCGCTCCGAGTTCACGTACTCTTTCCCGGTGAGTCCCGGCCAGAAGTTCATTCGCCTTTACTTTTACTCTGCTAACTATTCCAACTTTGAGAGCTCCAAAGCTGTCTTCTCCGTTACAACTGGCGCCTACACTCTGCTTCGGGATTTCAATGCTTCCCTCAACGTTGGCTCTCCTTACGACCATACTATTTTCCGGGAGTTCTGTGTGTATGTGGACCCAAACCATCAGAAACTCAATCTTACCTTCACTCCCACCAATCGAGACTCGTATGCTTTCATCAACGGGATTGAGATCTTGTCCATGCCCTCTGATCTCTATTATACCCCGCCCGATTCAAACGACCAAGGGGGTCGGGGCTTGAAGTTTCTTGGCCAAAATAATCAGTTCTTCCCAATCGAAAACTACACCTCTCTTCAGCTGCTATACCGAACAAATATCGGTGGCAACCCCATCTCCCCTCCGGGTGACACTGGAATGTTTCGAACTTGGTCGGACGAAGAAAAGTATTACGTGCCAGATCCTTTCTTTGATGCCCGTCCTGGTAACCTATCTATTAAACTCAATTACAGCAAAGTTCAGCCAGTCACAGCGCCAGATGTTGTGTATCGAACTGCCCGAACAATGGGACCGAACGCTAAAGACAACAAGAGCTACAACCTTACATGGGAGTACCTTGTAGATCCTGGGTTTGTTTACATGGTTAGGCTTCATTTCTGCGAGTTTCAAGCTGAAATCAATGAGGAAAATGATAGGGTGTTCTTAATTCATATTAATGACATAACTGCTGAGCCGTCCGCTGATGTGATTCGTTGGGCTGGCGGGAAAGGGATTCCAATTTACAAACAATATGCTCTGCATGTGCTCTCTAGGAATGACAACAAGAAAGAGAAGCTCTCTGTTAAGCTCCAAGCAAACCCAGACGATTCTGGAACAAGATTCACCAACGTGATCTTGAATGGAATCGAAATCTTCAAGTTAAACGATTCGAGTGGTAACTTGGCTGGAAAGAACCCAGACTCACCCACCCAATCTCTTCTTCCGTTGACCCCTCAAACAAATCATTCGTCAAATACAAAAATGGTGGCAATGGTAATATCTGCCGTGGTTGGAGGTGTTGCTCTATTATCAGCTCTCTGTTTATTTGTTTTTTGTCGGCGCAAAATATTTTCAGACAAAACCTCAACCGATGGGGCGGCTTCTTGGTGGGCTCCTTATTCCATATCAACCAACAAATCAAGCAAAGCCCGCAGCGCAAATCTCCCATCTGATTTGTGTCGTTACTTCACATTGTCGGAGATTAAATCCGCCACAAAGAACTTCGACGATGTTTTCATCATCGGTGTCGGCGGGTTCGGAAACGTCTACAAAGGCTACATCGACGATGGAACAACTCAAGTGGCGATCAAACGATTGAAACCAGGTTCCAAACAAGGAGCACACGAGTTCAAAACAGAGATCGAGATGCTCTCTCAACTTCGTCATCTCCATCTCGTCTCCCTAATTGGGTACTGCAACGACGGCAACGAAATGATTTTAGTCTATGACTACATGTCTCACGGAACCCTTCGTAGCCATCTCTACGGTGGCGACGAGCAACCTCTCAAATGGAAGCAACGCCTCCAGATCTGCATCGGATCAGCCAGAGGACTACACTACCTTCACACCGGAACCAAACACACCATTATCCACCGTGACGTGAAGACAACCAACATTTTGCTGGACGACAAATATGTTGCTAAGGTTTCCGATTTCGGGCTGTCGAAAGTGGGACCAACGAACATGTCGAAGGCGCATATTAGCACAGTGGTCAAAGGTAGCTTCGGTTACCTAGACCCAGAGTACTACCGGCGACAACAGCTAACAGAGAAGTCCGATGTATATTCATTCGGAGTAGTGTTGTGTGAAGTACTCTGTGCTCGTCCGCCATTGAAGCGCGACGCAGACAAAAAGCAAGTGTATCTAGCAGAGTGGGTGCGTAAGTGCTACCGCGACAACGCGGTGGGACAGATCGTGGACCCAAACATCAAGGGCGAGATCTCACCCGAGTGTTTGAGAAAGTTCATAGAGATTGCAGTTAGTTGCATCGAAGACGATGGGATAAATCGGCCGGCGATGAACGACGTGGTGTGGGGATTGGAGTTTGCATTGCAGTTGCAGGAAGCGTCCACGAAAAAGAAGATAGATGGAGATGACAAGAAGGACAACGGCGGCGATGAAGAAGCGTGGTTGATGGAGGAGATGTTGTTTAGTAGTTCCGTTGTGCGGTTTGGCGGGTCGGATACTGGCATTTGCAGTGATTTGACGACAAGCAGTAATGACGATTCTAGTTATACGTATAATAAAGGGATGTCGGGTACTGTTTTTTCTGAAATTAAGGACCCAACTGGACGATGA 2679 48.11 MADAKPSHASATATLLLAFVFLAVADETISYTPIDNIVVDCGSTQNSTLPDNRLWLQDVDSKFFPSDLRQNRMSLPADTQSSPVPDAPYRTARLSRSEFTYSFPVSPGQKFIRLYFYSANYSNFESSKAVFSVTTGAYTLLRDFNASLNVGSPYDHTIFREFCVYVDPNHQKLNLTFTPTNRDSYAFINGIEILSMPSDLYYTPPDSNDQGGRGLKFLGQNNQFFPIENYTSLQLLYRTNIGGNPISPPGDTGMFRTWSDEEKYYVPDPFFDARPGNLSIKLNYSKVQPVTAPDVVYRTARTMGPNAKDNKSYNLTWEYLVDPGFVYMVRLHFCEFQAEINEENDRVFLIHINDITAEPSADVIRWAGGKGIPIYKQYALHVLSRNDNKKEKLSVKLQANPDDSGTRFTNVILNGIEIFKLNDSSGNLAGKNPDSPTQSLLPLTPQTNHSSNTKMVAMVISAVVGGVALLSALCLFVFCRRKIFSDKTSTDGAASWWAPYSISTNKSSKARSANLPSDLCRYFTLSEIKSATKNFDDVFIIGVGGFGNVYKGYIDDGTTQVAIKRLKPGSKQGAHEFKTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYDYMSHGTLRSHLYGGDEQPLKWKQRLQICIGSARGLHYLHTGTKHTIIHRDVKTTNILLDDKYVAKVSDFGLSKVGPTNMSKAHISTVVKGSFGYLDPEYYRRQQLTEKSDVYSFGVVLCEVLCARPPLKRDADKKQVYLAEWVRKCYRDNAVGQIVDPNIKGEISPECLRKFIEIAVSCIEDDGINRPAMNDVVWGLEFALQLQEASTKKKIDGDDKKDNGGDEEAWLMEEMLFSSSVVRFGGSDTGICSDLTTSSNDDSSYTYNKGMSGTVFSEIKDPTGR 892
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9719740 9722926 - Sed0019422.1 Sed06g0863 717406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0863 892 ProSiteProfiles Protein kinase domain profile. 535 810 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed06g0863 892 CDD STKc_IRAK 541 804 - -
Sed06g0863 892 FunFam Receptor-like protein kinase FERONIA 612 829 - -
Sed06g0863 892 PANTHER OS03G0124300 PROTEIN-RELATED 12 480 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Sed06g0863 892 Gene3D Phosphorylase Kinase; domain 1 498 611 - -
Sed06g0863 892 FunFam FERONIA receptor-like kinase 231 422 - -
Sed06g0863 892 Pfam Malectin-like domain 39 420 IPR024788 -
Sed06g0863 892 Pfam Protein tyrosine and serine/threonine kinase 541 804 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed06g0863 892 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524(InterPro)
Sed06g0863 892 SMART serkin_6 535 810 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed06g0863 892 Gene3D - 232 422 - -
Sed06g0863 892 Gene3D - 36 197 - -
Sed06g0863 892 FunFam Receptor-like protein kinase FERONIA 507 611 - -
Sed06g0863 892 FunFam FERONIA receptor-like kinase 36 197 - -
Sed06g0863 892 SUPERFAMILY Protein kinase-like (PK-like) 510 809 IPR011009 -
Sed06g0863 892 Gene3D Transferase(Phosphotransferase) domain 1 612 834 - -
Sed06g0863 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0860 Sed-Chr6:9698807 Sed06g0863 Sed-Chr6:9719740 0.00E+00 dispersed
Sed06g0863 Sed-Chr6:9719740 Sed06g1451 Sed-Chr6:39303191 0.00E+00 dispersed
Sed06g0862 Sed-Chr6:9712294 Sed06g0863 Sed-Chr6:9719740 0.00E+00 tandem
Sed06g0863 Sed-Chr6:9719740 Sed06g0864 Sed-Chr6:9725309 7.00E-307 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79354 PF12819 Malectin_like 1.40E-46 CL0202 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0863 - - - 0.0