Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g0910 ATGTCGCCTGCTGATTCTTCACGGGAGGAAAATGTTTACTTGGCCAAGTTGGCCGAGCAGGCCGAACGGTACGAGGAAATGGTGGAGTTCATGGAGAAAGTTGCCAAGACTGTTGATGTTGAGGAGATGACGGTTGAGGAGAGGAATCTTCTTTCTGTTGCTTACAAGAATGTCATTGGAGCTCGGAGGGCATCGTGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTAGGGGAAATGATGACCATGTTTCAATTATCAAGGAGTACCGTGCCAAAATTGAGACCGAATTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCGAAGGTGTTTTACCTCAAAATGAAAGGTGACTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGGAAAGAATCAGCTGAGAGCACATTATTAGCTTACAAGTCTGCTCAGGATATTGCTCTGACTGAATTGCCCCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCGAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGACACTTTGGGTGAAGAATCATACAAGGACAGCACTTTGATCATGCAACTTCTCCGAGACAACTTGACCCTTTGGACTTCTGATGTTGGGGATGAAGCTGGCGATGAGATTAAGGAAGCCTCTAAACGTGAATCGGGAGAGTGA 780 45.64 MSPADSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDVEEMTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKEYRAKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKESAESTLLAYKSAQDIALTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDVGDEAGDEIKEASKRESGE 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11278689 11281310 + Sed0018031.1 Sed06g0910 717453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g0910 259 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed06g0910 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Sed06g0910 259 Coils Coil 14 34 - -
Sed06g0910 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Sed06g0910 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Sed06g0910 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Sed06g0910 259 SMART 1433_4 8 251 IPR023410 -
Sed06g0910 259 PIRSF 14-3-3 3 250 IPR000308 -
Sed06g0910 259 Gene3D - 2 251 IPR036815 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Sed06g0910 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Sed06g0910 259 FunFam 14-3-3 protein epsilon 4 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0158 Sed-Chr4:1074549 Sed06g0910 Sed-Chr6:11278689 2.30E-117 dispersed
Sed06g0910 Sed-Chr6:11278689 Sed13g2141 Sed-Chr13:26046387 1.50E-116 dispersed
Sed06g0910 Sed-Chr6:11278689 Sed06g0911 Sed-Chr6:11278689 1.60E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g0910 K06630 - csv:101222068 490.345