Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1123 ATGGACCTCTCCGAAATTGCCAGCAAGCTAGATCTTTCCGACTCCGAACCCCTTATCCGAAAAGCCGAAGAATTTTGTCGCCTCTTTGATCTCCATTTCAATTCTTCGGTTAACGGCATTGGACAGGTTTGCAAGCCCATAATCTGTTTGGAAATTGCTGCCACAAGATTGGGGACTCTACTTGATAGGTCAAGAGCTATCAAGTTAAGTGGGATGTCAGAGAAGGCTTATACCAAATCTTACAATTTTGTGCAGAATAGTCTTGGTTTCAAAAGTAGGCTCGATATTAGAGAATTGGCTGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCGAAAGGGCTTATCTCTATACAAGGATCGGTTTGTTGCATCACTGCCCGCTTCTCGACGTGCGAGAGCTGACTTCTCCAGATCGGTATTTACCGCTGTAGCCTTCTACTTGTGTGCAAAAAAGCACAAGCTCAAGGTTGATAAAGTCAAGCTCCTTGAACTAAGTGGTACATCTGAATCTGAATTCTCATTTGTTGCAACATCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTGTAGTGAAAAGAAAGATCCCAGGGATGCCAAAGGGATCAGAGACATATTAGACACATTGCCAGAAAAACGGAAGCTCGAGGATGGCGGTTATTTGTCTGATGATGGCGAAGAGTTTCCAAGGTCAAAACGACGCAAGTTAATGGCCGAACAAGCCTAA 732 44.13 MDLSEIASKLDLSDSEPLIRKAEEFCRLFDLHFNSSVNGIGQVCKPIICLEIAATRLGTLLDRSRAIKLSGMSEKAYTKSYNFVQNSLGFKSRLDIRELAVQFGCVRLVASVRKGLSLYKDRFVASLPASRRARADFSRSVFTAVAFYLCAKKHKLKVDKVKLLELSGTSESEFSFVATSMKDLCFDVFGICSEKKDPRDAKGIRDILDTLPEKRKLEDGGYLSDDGEEFPRSKRRKLMAEQA 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31970625 31973799 + Sed0002473.1 Sed06g1123 717666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1123 243 MobiDBLite consensus disorder prediction 217 243 - -
Sed06g1123 243 Gene3D - 91 188 - -
Sed06g1123 243 Pfam Origin recognition complex subunit 6 (ORC6) 3 91 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
Sed06g1123 243 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 239 IPR020529 GO:0005664(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Sed06g1123 243 CDD Orc6_mid 92 188 - -
Sed06g1123 243 Pfam ORC6 second cyclin-like domain 94 184 IPR054113 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0083 Sed-Chr2:10289748 Sed06g1123 Sed-Chr6:31970625 2.90E-99 dispersed
Sed06g1123 Sed-Chr6:31970625 Sed06g1125 Sed-Chr6:31970625 8.60E-135 dispersed
Sed06g1123 Sed-Chr6:31970625 Sed06g1124 Sed-Chr6:31970625 8.60E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1123 K02608 - csv:101204841 376.326