Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g1126 | ATGGACCTCTCCGAAATTGCCAGCAAGCTAGATCTTTCCGACTCCGAACCCCTTATCCGAAAAGCCGAAGAATTTTGTCGCCTCTTTGATCTCCATTTCAATTCTTCGGTTAACGGCATTGGACAGGTTTGCAAGCCCATAATCTGTTTGGAAATTGCTGCCACAAGATTGGGGACTCTACTTGATAGGTCAAGAGCTATCAAGTTAAGTGGGATGTCAGAGAAGGCTTATACCAAATCTTACAATTTTGTGCAGAATAGTCTTGGTTTCAAAAGTAGGCTCGATATTAGAGAATTGGCTGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCGAAAGGGCTTATCTCTATACAAGGATCGGTTTGTTGCATCACTGCCCGCTTCTCGACGTGCGAGAGCTGACTTCTCCAGATCGGTATTTACCGCTGTAGCCTTCTACTTGTGTGCAAAAAAGCACAAGCTCAAGGTTGATAAAGTCAAGCTCCTTGAACTAAGTGGTACATCTGAATCTGAATTCTCATTTGTTGCAACATCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTGTAGTGAAAAGAAAGATCCCAGGGATGCCAAAGGGATCAGAGACATATTAGACACATTGCCAGAAAAACGGAAGCTCGAGGATGGCGGTTATTTGTCTGATGATGGCGAAGAGTTTCCAAGGTCAAAACGACGCAAGTTAATGGCCGAACAAGCCTAA | 732 | 44.13 | MDLSEIASKLDLSDSEPLIRKAEEFCRLFDLHFNSSVNGIGQVCKPIICLEIAATRLGTLLDRSRAIKLSGMSEKAYTKSYNFVQNSLGFKSRLDIRELAVQFGCVRLVASVRKGLSLYKDRFVASLPASRRARADFSRSVFTAVAFYLCAKKHKLKVDKVKLLELSGTSESEFSFVATSMKDLCFDVFGICSEKKDPRDAKGIRDILDTLPEKRKLEDGGYLSDDGEEFPRSKRRKLMAEQA | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 31970625 | 31973799 | + | Sed0002473.4 | Sed06g1126 | 717669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g1126 | 243 | MobiDBLite | consensus disorder prediction | 217 | 243 | - | - | |
Sed06g1126 | 243 | Gene3D | - | 91 | 188 | - | - | |
Sed06g1126 | 243 | Pfam | Origin recognition complex subunit 6 (ORC6) | 3 | 91 | IPR008721 | GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro) | |
Sed06g1126 | 243 | PANTHER | ORIGIN RECOGNITION COMPLEX SUBUNIT 6 | 1 | 239 | IPR020529 | GO:0005664(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER) | |
Sed06g1126 | 243 | CDD | Orc6_mid | 92 | 188 | - | - | |
Sed06g1126 | 243 | Pfam | ORC6 second cyclin-like domain | 94 | 184 | IPR054113 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g1124 | Sed-Chr6:31970625 | Sed06g1126 | Sed-Chr6:31970625 | 8.60E-135 | dispersed | |
Sed06g1125 | Sed-Chr6:31970625 | Sed06g1126 | Sed-Chr6:31970625 | 8.60E-135 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g1126 | K02608 | - | csv:101204841 | 376.326 |