Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1373 ATGGAGAATTTGATGGGTCTGCTCAGAATTCATGTGTTTAGAGGAGTTAATCTTGCTATAAGAGATGTTTCTAGCAGTGATCCTTATATTGTGTTCAAGATGGGCAAACAGAAGTTGAAAACTCGAGTAGTGAAGCAAAATATCAACCCCGAGTGGAATGAAGATCTAACTTTGTCTATCCAAAATCCAAATCTCCCAGTCAACGTGCTTGTTTACGACAAGGACTTGTTTTCGCTAGACGATAGGATGGGCGATGCCGAGTTCGACGTTCGACCATTCTTGGATGTTGTAAAGATGAGACTAAACGACATTCCAAGTGGAACTATTATAAGAAAGATTCAACCGAGTAGAGACAACTGCTTATCTGAGGAAAGTTGCATTATTTGGGAAAATGGGCAAGTTATTCAAAAAATGTTTCTGAGGCTTAGAAATGTAGAGTCTGGTGAAGTTGAGCTGCAATTGCAATGGATTGATATTCCAGGCTCTAGGGGATTGTAG 498 39.96 MENLMGLLRIHVFRGVNLAIRDVSSSDPYIVFKMGKQKLKTRVVKQNINPEWNEDLTLSIQNPNLPVNVLVYDKDLFSLDDRMGDAEFDVRPFLDVVKMRLNDIPSGTIIRKIQPSRDNCLSEESCIIWENGQVIQKMFLRLRNVESGEVELQLQWIDIPGSRGL 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38077225 38078928 + Sed0009347.1 Sed06g1373 717916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1373 165 Pfam C2 domain 6 92 IPR000008 -
Sed06g1373 165 Gene3D C2 domain 4 160 IPR035892 -
Sed06g1373 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Sed06g1373 165 SMART C2_3c 7 102 IPR000008 -
Sed06g1373 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Sed06g1373 165 CDD C2_ArfGAP 6 148 - -
Sed06g1373 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1771 Sed-Chr1:12954990 Sed06g1373 Sed-Chr6:38077225 3.40E-62 dispersed
Sed01g2824 Sed-Chr1:23530807 Sed06g1373 Sed-Chr6:38077225 2.20E-81 dispersed
Sed06g1373 Sed-Chr6:38077225 Sed12g2119 Sed-Chr12:31868325 8.40E-65 dispersed
Sed05g2703 Sed-Chr5:38465378 Sed06g1373 Sed-Chr6:38077225 9.00E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1373 - - - 0.0