Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1491 ATGGGAACAAAAGTGCAGTATGAAAGTTATTTGCCAGGATATCACTCAATGAGGGATCTAAATGAAGATTCTCATGGTTGTAGCTGGCCCTTATATTACAGTGAAAAAGCGTGTCAGAACGGCCAATATTACAATGGAGTTTTGCCAAGAGCTACGTCAGATGCATATCTCGGCTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAACACGAAGCCATATTCAAGAACCAGGTCTGTGAGCTGCATCGGTTATATATAAAACAAAGAGAGTTAATGAGCGATATTAAAAGATCAGAACACAGACACCCGATACCAATAGACATAACGTTCTCATCTAGTCCTCTTGCATCTCAAAGTACTCCTGATGTTGCAAGGAAATGGCATCTCCCGAGTGCCCCTCTTTCAATTTCTTCCAGTGGTGGACCATCTGTACCTGGCGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAAGAATAGAAGCGACGGTCTCTTACTATCCCAAAATGGAACTAGTTCAAAAGATTGCGAGGTACTAGAGTCAAGACCCTCGAAGTTTAAGAGGAAAATGTTCGATCTTCAGCTTCCAGCAGATGAGTACATTGATAGCGAAGAAGAGGAGGTATTTCATGATGAAAAAGTGCGTCCCAAGTTGGGTAGCTATTCAGGTGGTAACAATAAATTTGAGACTCCGAGCTGTGTCCCGGAAAACTTGTATGTGAATCCTAGCGAAAGAAGTAGTGGCCAAGGTGCTAGTTTGAGATCAGACTCGTGTTTATGGAACAGATGTGGTTTGGCTGACTTAAATGAGCCGGTTCAGGCCGAAGAGACAAATGGATCCAATTTTTTTGATCTTCCTAGTGCTCGTGATTCCAGAAATGTGGATAATCAATGCCCAGTTCTATCGTCTACGAAGCAAGAAATATTTTTGTACTCCAGTAATGAAGGTGGACATGCAACAAACAAAAATTCGTATATCGAGAATGATAGAAGAGAGGCATTCCCTAACATCTTTGGAGCAGGACATAGCAAGGACAGCGAGAAACCGTTTACTCGTGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCAATTCAAGTTCCACTTAACAAATTTCATGAACTTCCAGTCTGCTATCTCAAAGATAAAAGCAAGGTTCAACAGGAGCTGGTCAGGCCAGATTTGCAATTATCCAAAAGAAGTTATGAAATGTCCAACACTGGGGATCCTAGTTATCCTTTTGGTTCTCAGATATCTCGTACATATCCGATTGCTTCTTCTTCGGACATGGGAAAATCTTGGGCTCCCTCCGGTTCACCTTGGGAAAAACCGAATGTAAAGTCCCCATCATTTCATGCACAGCAGTGTTTGAAATCGGCTGCTGTTGTTCACAAGAGTTTTCCTACATCAGCTCAGAGCAATGGAATTTTTGGAGATAGATGGCATTTGAGTAATGACTCTAGATCCAATCCCGGGTCTGGTTGCGAAACTCCATACCAGAATGGATTTTCTCTTGGGTCTACCTCCGGTCCCAAAGGAGTTCTCTCCTCAACCATAAGGCACGGCCATGTGACCGACTACTACAAGGGCTCCGGTTGTGTGGGCACGAATTCTCCAAAAGGCATAAACTTGAATGTAGCGCTCTCAAACAGTTTGTCTAATGAGGCAGGTCAACAACCATATTTCAGGACTGGAGAGGTAGAACAGAAGAATGAGGACCATCATAATATAGTACCATGGTCAAGAGCTGTATCTCGTACTAAGAATGAAACAGTCAATTCAAAAAGATTTCCTGTGACTGGAGAGCTTAGTTTTGTGCTCTCTCCAAAGAATCCATTTTCTGACAGAAGTGAAACTGAAAATGGTGGTAAAGTTCTATGTTATCCAAACATGGAGTCTAATTCACATTGTAGTAACAACATTGAGCCCAGATTGTCGGAACACGGTGAATGCCGAAGTAACAGAAAACTTCTCGGGTTTCCCATTTTTGAAGGGCCACGCATTTCTAAGAACGAATCGTTTTCTCTTTCATCCCCATCAGCACCTCTTCCTAATCCATCTGAGAATCTAGTGGAAGATAACCAGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATACTTCAGTTTACGAGTCGGATAATGCTACTGCAGGAGCTTTGACTGTAGAGAATGGAAAGGACATGAAGACCTCTACTGTTAGAGTTGATATTGATTTGAACTCTTGTGTGAACGATGAAGAAACATCTATGAGACCTCTACCCGTGGCTTCTCAAAGTGCGAAGGAAAAGTTCGTGATAGAGATAGATTTGGAAATCCCGGCAATGCCCGAGACTGAAGACAACATAATTGCAGAAGAAAAATTTGAAGAGAAAGGAAATGAACAGATACTACAATCTCCTCAGCATAAGGCTGTTGATGTTCAGGACGATCTAATGGCTGTAGCAGCAGAGGCAATAGTTTCCATTGCTTCTTGCGGTCCTTCCTGTCATTTGGACGATACTGTTAGTTATGCGTCGGAAGATTTTTCAAGTGAGCTCCTAAATTGGTTAGCCGAGATAGTTTCCACACAAAGAGATGATGTACAGACCAAGTCTGCCACTGTATTGAGGGCCAAAGATGGCAGGGATAATGAGGAATCCTCTATGAGAGGGATTGATCACTTTGAACACATGACTCTGAGGCTAGTGGAGGTTGGTGAAGAAGACTATATGCCTAAGCCCCTTGTTCCGGAAAATATGGAAATTGAAGATGCCGGAACGAATCTGTTGCAGAATCGGCCCCGAAAGGGCCAGGCAAGGAGAGGTAGGCAACGAAGGGACTTTCAGAGGGACATCCTTCCTGGCCTTTCTTCTCTATCGAGGCATGAGGTTACAGAAGATCTTCAGACATTTGGTGGACTAATGCAAGCGACGGGTCACTCTTGGTATTCCAGAGTTACGAGGAGGAACTCTACTAGAAATGGTTGTGGTAGGGGAAGGCGACGATCCGTGATCAGTCCCCCACCCCCAGTGCATTCAGCATGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGTCTTGAGGATGGAAGCCTGACTGGTTGGGGCAAGACAACTAGACGGCCCCGTCGACAGAGATGCCCGGCCGGTAACCCTCCATCCGTTCCCTTAACTTAA 3174 43.42 MGTKVQYESYLPGYHSMRDLNEDSHGCSWPLYYSEKACQNGQYYNGVLPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVCELHRLYIKQRELMSDIKRSEHRHPIPIDITFSSSPLASQSTPDVARKWHLPSAPLSISSSGGPSVPGVEDVKSSLSSLKEKNRSDGLLLSQNGTSSKDCEVLESRPSKFKRKMFDLQLPADEYIDSEEEEVFHDEKVRPKLGSYSGGNNKFETPSCVPENLYVNPSERSSGQGASLRSDSCLWNRCGLADLNEPVQAEETNGSNFFDLPSARDSRNVDNQCPVLSSTKQEIFLYSSNEGGHATNKNSYIENDRREAFPNIFGAGHSKDSEKPFTRGQMEKFHLSSNPIQVPLNKFHELPVCYLKDKSKVQQELVRPDLQLSKRSYEMSNTGDPSYPFGSQISRTYPIASSSDMGKSWAPSGSPWEKPNVKSPSFHAQQCLKSAAVVHKSFPTSAQSNGIFGDRWHLSNDSRSNPGSGCETPYQNGFSLGSTSGPKGVLSSTIRHGHVTDYYKGSGCVGTNSPKGINLNVALSNSLSNEAGQQPYFRTGEVEQKNEDHHNIVPWSRAVSRTKNETVNSKRFPVTGELSFVLSPKNPFSDRSETENGGKVLCYPNMESNSHCSNNIEPRLSEHGECRSNRKLLGFPIFEGPRISKNESFSLSSPSAPLPNPSENLVEDNQKTRVLDINLPCDTSVYESDNATAGALTVENGKDMKTSTVRVDIDLNSCVNDEETSMRPLPVASQSAKEKFVIEIDLEIPAMPETEDNIIAEEKFEEKGNEQILQSPQHKAVDVQDDLMAVAAEAIVSIASCGPSCHLDDTVSYASEDFSSELLNWLAEIVSTQRDDVQTKSATVLRAKDGRDNEESSMRGIDHFEHMTLRLVEVGEEDYMPKPLVPENMEIEDAGTNLLQNRPRKGQARRGRQRRDFQRDILPGLSSLSRHEVTEDLQTFGGLMQATGHSWYSRVTRRNSTRNGCGRGRRRSVISPPPPVHSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPSVPLT 1057
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39603900 39610634 - Sed0011907.1 Sed06g1491 718034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1491 1057 MobiDBLite consensus disorder prediction 1030 1057 - -
Sed06g1491 1057 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 1047 - -
Sed06g1491 1057 Pfam Plant protein of unknown function (DUF863) 143 1047 IPR008581 -
Sed06g1491 1057 MobiDBLite consensus disorder prediction 986 1008 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1491 Sed-Chr6:39603900 Sed07g1966 Sed-Chr7:34389802 0.00E+00 dispersed
Sed06g1491 Sed-Chr6:39603900 Sed07g1965 Sed-Chr7:34389504 0.00E+00 wgd
Sed06g1491 Sed-Chr6:39603900 Sed08g2094 Sed-Chr8:35064577 4.00E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1491 - - - 0.0