Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1510 ATGAAGAGAAGACCCATTTATCGGTTCAAAATCTGGATCTGTGGGATGAAGGTGAAGGAGATTTTAAGTTTTTTGCTAATAGGTATTCCGGTTGTCGCCTTTGTTGTTTTGGTGCTTAGCAATCCGGCCGTGGATCTCTCTTTGGGTTTGGCCGAAGCCAGAGCTTTGGAGAGAGGTTCCGTTCATGGCACTTCTGTGATTCCAGAAAATGGTTCCTCTCATTTTTCCAAAAGAGACAAACTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAAGATCATGCTTGAGCAGATATCAATCTAGTTTATACAGAAGAACTTCAACCCACAAACCTTCTCCTTTCCTCCGCTCGAAACTTAGAGATTACGAAGCACTTCATCGACGCTGCGGGCCCCATACGAAACCATATAATGAAGCAGTAGAGCAACTAAGATCTGGCAGTAGAAGAGTTAGTTTGACAGAGTGTAAATATGTTGTATGGATATCTTATAGTGGGTTGGGAAACAAGATTCTCACTTTGGCTTCTACATTCCTCTATGCTCTCCTTACCAACCGTGTCTTGCTTGTTGACCCCAGTATGGACATGGCTGATCTATTTTGTGAGCCCTTCCCTGAAAAATCTTGGTTGCTACCAAATGACTTCCCCTTGACGGATCAATTCGGAAAATTTGATCCGAAATCTCCTCATTGTCATGGAAATATGCTGAAGACGAACACTCTAAACATGTCGACGGAGTCGTTCCCATCATATCTATATCTACATTTGATTCATGATTATGATGATCATGACAAACTTTTCTTTTGTGATCAAGAACAAGCTGTTTTAGACAGAGTCCCTTGGCTAATACTCAAGACAGATAACTACTTTGTTCCCTCCCTCTTTCTGATCCCATCTTTCAAACACAAACTGAGTAACTTATTTCCCCGAAAAGACACCGTCTTCCATCATTTAGGCCGGTATCTTTTCCACCCATCGAATCGTGTATGGGGACTAATTACAAGATACTACGAAGCATACCTATCGAGTGCAGATGAACGAATAGGAATTCAAGTAAGAGTGTTCGAGAGCGGACCGGGACCCTTCGAACATATAATGAATCAGATTTTAGGTTGTACTCTCAGGAAGAAGCTACTGCCTAAGGTAGACAAGGAAGGCTTCTCTTCCATTCATTTGAAACGCCGAAGAGTGAAAGCTGTTTTGATGACATCTTTGAATTCGGGATATTATGAAAAAATGAGAACCATGTACTGGGAAAACCCGACCACGACCGGAGAGGTCATCGCTATTCACCAACCGAGCTACGAAATGTATCAGCAGACAAAGAATAAGACTCACAACATGAAAGCATGGGCAGAAATATACCTACTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCTACATTTGGCTATGTGGCTCAAGGCCTCAGCGGATCGAAGCCGTGGGTTCTTTACAAGCCAGAGAACATGACTGTGCCTAATCCACCGTGTCGTCGGGCGATATCGATGGAACCTTGCTTTCATGCTCCTCCATTCTATGATTGCAAGGCAAAGAAAGGAATAGATACTGGTGCTGTTGTTCCCCATGTAAGACATTGTGAAGACATGAGTTGGGGGCTTAAGCTTGTTGATCAATAG 1644 42.94 MKRRPIYRFKIWICGMKVKEILSFLLIGIPVVAFVVLVLSNPAVDLSLGLAEARALERGSVHGTSVIPENGSSHFSKRDKLIGGLLIPGFDERSCLSRYQSSLYRRTSTHKPSPFLRSKLRDYEALHRRCGPHTKPYNEAVEQLRSGSRRVSLTECKYVVWISYSGLGNKILTLASTFLYALLTNRVLLVDPSMDMADLFCEPFPEKSWLLPNDFPLTDQFGKFDPKSPHCHGNMLKTNTLNMSTESFPSYLYLHLIHDYDDHDKLFFCDQEQAVLDRVPWLILKTDNYFVPSLFLIPSFKHKLSNLFPRKDTVFHHLGRYLFHPSNRVWGLITRYYEAYLSSADERIGIQVRVFESGPGPFEHIMNQILGCTLRKKLLPKVDKEGFSSIHLKRRRVKAVLMTSLNSGYYEKMRTMYWENPTTTGEVIAIHQPSYEMYQQTKNKTHNMKAWAEIYLLSLSDVLVTSAWSTFGYVAQGLSGSKPWVLYKPENMTVPNPPCRRAISMEPCFHAPPFYDCKAKKGIDTGAVVPHVRHCEDMSWGLKLVDQ 547
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 39776036 39779703 + Sed0022264.1 Sed06g1510 718053
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1510 547 PANTHER FUCOSYLTRANSFERASE 2-RELATED 23 546 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed06g1510 547 Pfam Xyloglucan fucosyltransferase 77 518 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed06g1510 547 FunFam Galactoside 2-alpha-L-fucosyltransferase 154 205 - -
Sed06g1510 547 Gene3D - 153 204 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1510 Sed-Chr6:39776036 Sed13g0692 Sed-Chr13:4803175 1.90E-142 dispersed
Sed01g2333 Sed-Chr1:17627005 Sed06g1510 Sed-Chr6:39776036 9.50E-188 wgd
Sed06g1510 Sed-Chr6:39776036 Sed07g1952 Sed-Chr7:34033334 2.10E-266 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1510 K13681 - csv:101216541 897.501