Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1618 ATGGAAGAACTTAAGACTCAACTTTTATGGAGAGTTCTTCCATTTTTGGCTATGGTGAGCTTGGAAGGCTGTACAATTGCACTAACTATTTTGGCAAAAACAGCCATTACTTATGGAATGAGCACTTTTGTTTTTGTTGTGTACATAAACTCTGTATCTACCATTGTTCTTCTTCCTTATTCCTTCATCTTTCACTATAATGACAGAGAGGAATATCAACAATCTTTGTTTTCTTTTCCTCTTCTTCTCCGAATCTTCCTCTTGGGTTTCATAGGGATGTGTATTTCTCAGAACCTTGCATTTTTGGGCCTAAGCTACAGTTCTCCAATTGTTGTATGTGCAATGGGTCTTATGCTCCCAGCCATTTCTTTCATACTTTCAATTCTTCTCAGGAGGACAAAAATTGATTGGAGCAGCCCAAGCTTCATTACCAAAGTAGTTGGAACAGTTATTTCAGTTATAGGGGCAACCTCGGAGGAGCTTTACTTAGGTCCAGTTGTTGGTCAACGTCCAGCTTCTTCTTTACATTTACAATTCAAACAAAAGCTTTTGGTGTTCACTTCAAATACACAAAGTTGGATTTTTGGTGGCCTTTTCTTATTAGCTGCTTCTTTATGTGTCTCAATATGGAACATTATTCAGTTGGGAGTCATGAAACAATACTCACAAGTGATGAAAGTTGCCTCCTGTTATAGTTTGGTGGGCACTTTTCTCTCCGCGACAATGGCTTTCTTCGTCATCGATGACTCGAGCGCGTGGAGAATCAAATCCAACTTCGATCTCTTTCTTATCGTCGCAACTGGGATTTTTAGCGGTTTGATTCGGAATCGAGTGCAAATACGGTGCATGCAAATGAAAGGGCCACATTATGTGCCCATGTTCAAGCCATTTGGCATTCTTTGGGCTACATATTTTGGCTCCACATTCTTTGGAGATACTTTTCACTATGGAAGTGCTATGGCAGCACTTATAGCTGGAATTGGATATTTGACTGTAATGTGGGGGCAAATGAATGAAGATCAAGGATTAGGAGAAGACAAAGATGAAAAAAGCTATAATGATGATTTTTCATCAGCCAAAGTTCCACTTCTAGATGAAGAATCACAAGTGTAA 1113 39.26 MEELKTQLLWRVLPFLAMVSLEGCTIALTILAKTAITYGMSTFVFVVYINSVSTIVLLPYSFIFHYNDREEYQQSLFSFPLLLRIFLLGFIGMCISQNLAFLGLSYSSPIVVCAMGLMLPAISFILSILLRRTKIDWSSPSFITKVVGTVISVIGATSEELYLGPVVGQRPASSLHLQFKQKLLVFTSNTQSWIFGGLFLLAASLCVSIWNIIQLGVMKQYSQVMKVASCYSLVGTFLSATMAFFVIDDSSAWRIKSNFDLFLIVATGIFSGLIRNRVQIRCMQMKGPHYVPMFKPFGILWATYFGSTFFGDTFHYGSAMAALIAGIGYLTVMWGQMNEDQGLGEDKDEKSYNDDFSSAKVPLLDEESQV 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 40932439 40935516 - Sed0005480.1 Sed06g1618 718161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1618 370 PANTHER WAT1-RELATED PROTEIN 16 348 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed06g1618 370 Pfam EamA-like transporter family 27 151 IPR000620 GO:0016020(InterPro)
Sed06g1618 370 MobiDBLite consensus disorder prediction 344 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1618 Sed-Chr6:40932439 Sed12g1459 Sed-Chr12:14680027 3.00E-30 dispersed
Sed04g0647 Sed-Chr4:5083563 Sed06g1618 Sed-Chr6:40932439 8.50E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1618 - - - 0.0