Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1626 ATGATGGCTTATCAGAGCCTTGGGGTTGTCTATGGGGAATTGGGCACTTCGCCTCTATATGTCTATAAGAACACTTTTGGAGAAGATATCGGTCACTCGAAGAGCAATGATGAGATTTATGGCGTTTTGTCCTTTGTTTTCTGGACTCTCACCATTGTTCCTTTGCTTAAGTACATATTTATTGTCCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCGTTGTATTCGTTATTGTGTCGACATGCCCGAGTTAGTTCATTGCCTAATACTCAGTTGGCTGATACTGAACTCACTGAGTACAAGATGGATGCCCTTGGTTCGCCATCTCAAGAGAGCTGTGGATTCAAACTCAAATCCGCCTTAGAAAAGCGTCAGGTTCTGCAAAAGTTCTTGCTTGTTCTTGCTTTGGTTGGGGCTTGCATGGTGATAGGGGATGGCATCTTAACACCAGCTATTTCTGTTCTTTCGGCGGTTTCTGGTCTCGAGCATACCATGGCGAAAGAGCATCACCAATATATAATAATCCCGATTTCATGCATCGTACTGATCGGTTTGTTTGCTCTTCAACACTACGGCACACACAGGATTGGCTTCTTGTTTGCTCCGATAGTGACAGTGTGGCTATTCTGTATCGGTGCCATTGGCTTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTAATCCTCGTTACATGTTTAAATTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATTATGCTGTGCATTACTGGTTCGGAGGCAATGTTTGCTGACCTTGGGCATTTTTCACAGTTGTCAATTAAGATTGCTTTCTCTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTTTCTCTAAATTATACCACTCCAAATGACCATCGAATCGGGTTTTATGTATCTGTACCTGAAAAACTGAGGTGGCCTGTTCTTATAATTGCCGTGCTTGCTGCCGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCCCGAGTCAAAATTGTCCATACATCCTCGAAAGTTCACGGTCGGATTTATATCCCGGAGATTAATTGGATTTTAATGCTGCTGTGCTTGGCTGTTACCATAGGTTTCAGAGATACAAAGCGCTTGGGTCATGCCTCAGGTTTGGCCGTGATCACTGTGATGCTCGTTACTACGTGCTTAATGTCCCTCATTATCGTCCTGTGCTGGCACCGAAGTGTATTTTTTGCCATAGGCTTCATCTTCTTCTTTGGCACCATTGAATCTCTGTATTTCTCAGCTTCTCTTATCAAATTTCTGGAAGGAGCTTGGGTTCCAATTGCAATATCTGTTGTCCTCATGATCGTGATGTATGTCTGGCACTATGGTACTCTTAAGAAGTTTGAATTTGACATGCAAAATAAGGTTTCTATTAACTGGCTACTTGGTTTGGGTCCAAGCCTAGGCATCGTAAGAGTACGTGGCATTGGTGTTATACAGACGGAGCTCGTTTTGGGAATCCCTGGTATCTTCACCCACTTTGTCACCAATATTCCTGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATACATCCCGGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATCGGTCGTATTGGTACGAGTGAATATAGACTCTATAGGTGCATTGTGCGATATGGTTATCGGGATGTTCACAAAGACGACGTAGAGTTCGAAAATGACCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGCTAGTGCAGAGTCTAGTGGTTCTAAACCGGGCTTCGACAAAGATGGTGAAAAGATGACGGTCTTCGGGACATCTTCTACCCATGAAGATAGAATCCAGTTGGCTGAGACCGATAAAAACGAAGACTCGGAAGAACTGTACAGAGCTTCAGATAAAAGGGAAATAAGGTCACCAACGCCAGTTAGAAAAAGAGTACGTTTCATCATACCCGAAAGCCCGAAAATCGACACGGATACAACTGCAGAACTACAAGAGCTAATGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCACACATGAAAGCAAAACAAGGATCGAGCACGCTGAAACGCGTGTCGATCAACTTCGTTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTAACTACCCTGTAGGTTTATCACACACATCATCAGCCCTTGAGGTGGGTATGATGTATCTTGTTTAG 2277 43.52 MMAYQSLGVVYGELGTSPLYVYKNTFGEDIGHSKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADTELTEYKMDALGSPSQESCGFKLKSALEKRQVLQKFLLVLALVGACMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYIIIPISCIVLIGLFALQHYGTHRIGFLFAPIVTVWLFCIGAIGLYNIIHWNPGVYRAINPRYMFKFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFSFMVYPSLLLAYMGQAAYLSLNYTTPNDHRIGFYVSVPEKLRWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKVHGRIYIPEINWILMLLCLAVTIGFRDTKRLGHASGLAVITVMLVTTCLMSLIIVLCWHRSVFFAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISVVLMIVMYVWHYGTLKKFEFDMQNKVSINWLLGLGPSLGIVRVRGIGVIQTELVLGIPGIFTHFVTNIPAFHQVLVFLCIKYIPVPHVRPEERFLIGRIGTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSASAESSGSKPGFDKDGEKMTVFGTSSTHEDRIQLAETDKNEDSEELYRASDKREIRSPTPVRKRVRFIIPESPKIDTDTTAELQELMEAREGGVAYILGRSHMKAKQGSSTLKRVSINFVYEFLRKNSREANYPVGLSHTSSALEVGMMYLV 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41035090 41040529 - Sed0022667.2 Sed06g1626 718169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1626 758 NCBIfam potassium uptake protein 2 756 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed06g1626 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 757 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed06g1626 758 MobiDBLite consensus disorder prediction 637 654 - -
Sed06g1626 758 Pfam K+ potassium transporter integral membrane domain 3 498 IPR053951 -
Sed06g1626 758 Pfam K+ potassium transporter C-terminal domain 512 753 IPR053952 -
Sed06g1626 758 MobiDBLite consensus disorder prediction 632 654 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0640 Sed-Chr4:4946677 Sed06g1626 Sed-Chr6:41035090 0.00E+00 dispersed
Sed06g0572 Sed-Chr6:5021405 Sed06g1626 Sed-Chr6:41035090 0.00E+00 dispersed
Sed06g1626 Sed-Chr6:41035090 Sed11g1933 Sed-Chr11:33739172 1.0e-311 dispersed
Sed06g1625 Sed-Chr6:41035090 Sed06g1626 Sed-Chr6:41035090 0.00E+00 tandem
Sed06g1626 Sed-Chr6:41035090 Sed06g1627 Sed-Chr6:41035090 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1626 K03549 - csv:101212925 1344.33