Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1698 ATGCATAACACCATTTTCATGTGTGTTCCTCTAATCTTACTCTTATCATCTCTACTATTTCTCAAAACAAACAACAAGAAGAATCATGTTCCTCCAAGCCCTCCAAAGCTTCCCTTATTGGGTCATTTGCACCTCATTAGCTCCCTCCCCCATCGCTCTTTCTACAAACTCTCGAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTCCATCCCAACCATCGTGATCTCCTCCGCCGCCGCCGCCCGAGACTTGTTCAAACTCCACGACCTCGCTTCCTGCAGCCGCCCTCTCTTGTATGGCAACGGAAGACTCTCGTACAACTATCTCGACATGAGCTTCTCCCCGTACAATGATCACTGGAGGGAAGTTCGAAAGATTTGCGCGTTTGAGCTCTTCAACTCTTACGCGGTGCAATCGTTTCAGGTCATTCGAGAACAAGAGGTGGGGTTGTTGCTAAACTCCATTTCTCGCTCTTTGTCTTCTTCCACTCCAGTTGATTTGAGTGAGAAGTCGTATTCGCTTACCGCGAATACGATTACGCGGATTGCTTTCGGGAAGATCTTTAGAGGGGGTGAGCTTGATGGTGAGAATTTTCAAGAAGTTGTTCGTAGAGCGGTTGCAGCAATGGGGTATTTTTGTGCTGATTTTTTTCCTAGAATTGGTTGGATTATTGATTGGATTAGTGGCAGACGTGGCAGATTGGATAAGACTTTTGCTGAGTTGGATGCTTTTTTCCAACATTTAATTGATGATTGCATCAACTTTAATGGGGCTTCTCATAATGAAAAGAACATTGTTGATGTTCTTTTGAAATTGCAAACAGAGCACTCTGTTGATTGTGATGGTTTCAAACTCACTAGAGATTGCATCAAGGCACTTATTATGGATATATTTCTAGCCGGAGTTGACACAGGAGCAGGGGTTATTGTTTGGGCAATGACAGAGCTAGTTAAGAATCCAAGAGTGATGAAAAAGCTACAAAATGAGATAAGAAACTGCATCAAAGAAGATCAGGTGAAGGAAAGTGAACTAAAAAAGCTTCAATATTTAGAAATGGTATTGAAAGAGGTTCTAAGATTGCATCCTCCAGTCCCACTTCTACTTCCAAGAGAAACCATATCCCATTTCAAGCTAAACGGTTACGATATCGACCCGAAAGTTCATCTCTATGTCAATGTTTGGGCGATCGGGCGAGATGCAAATTACTGGACTAATCCAGAAGAGTTCTTGCCAGAAAGATTTATGGGAAGCGATATAGATTACATTGGACAGAATTTCGAGTTCTTACCGTTCGGAGCTGGACGAAGAAGTTGTCCAGGGATAAATATGGCAATCACTCTAGTGAAACTCACATTAGCCAATTTGTTGCTTTGTTTTGATTGGAAATTAGCAGATGGAATGAAAGAAGAAGATTTGGATATGGAAGAGGATGATGGTTTGACAGTTACCAAAAAATCACCTCTTAAACTTATTCCAATTGAGCACTTGAGAACATTGGAATTTGAAGCTTTGATCATCAACCAATTCAATAAGAACAAAACAAAAATGCTTAACCTTGATCAGATCATGCATAGCCATTCCATATGGGTGGTTTCTCTGTTCTTGTTGTGGTCTTTCCTACTGCTTAAAACAAAGACATACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCACTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCTCATCGCTCTTTCAACAAACTTTCACAAAAATACGGCCCCATCATGCTCCTCAAGCTCGGCTCCATCCCGACCATCGTAATCTCCTCTGCCGCCGCTGCAAAAGAGGTGTTACAAGTGCATGATCTTGCTTGTTGCGGCCGGCCTCGCTTAGCCGCTAGTGCAAGATTTTCATACAACTTCTTAGACATAGGCTTGTCTCCATATACTGATCATTGGAAGGAAGTTCGAAAGATTTGTGTTCTTGAGCTCTTCAGCCCTCGGCGGGTGCAGTCGTTTCAGTTGATAAGAGAAGAAGAGGTTGCTCTACTTATAATGTCATTCTCTCAATCTTCATTACTTGAAGTTCCTGTTGATTTGAGTGAGGAATCATATATTCTCACTGCAAATATAACAACTAGAATAGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATGATGGAAATTTTCACCAAGTTATCCGTAGAGCGATTGCAGCATTGGGAAGCTTCTCGATGAGTGACTTCTTTCCTCGTGTTGGTTGGATTATTGATCGATTTAGTGGTGTTAATGGTAGGCTGGAGAAGAGCTTTGTTGAGTTGGATGCTTTTCTTCAACAAATAGTCGAGGACTGTATCAACCGGGTAGGGACTTCACATAATGAAGAAAATATTGTTGATGTTCTGTTGAAAATGGAGAAATATAGCTCTGAGCCAAATACCTTACAACTCACTAAAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAATCCAGGCGCAGGCACCATTATTTGGGCAATGACAGAATTAGTAAGGAATCCACGAGTAATGAATAAACTACAAAATGACATTAGAGGTTGCATAAAAGAAGATCAAGTGAAAGAGAACAACCTCGAAAAGCTTCAATATCTAAAAATGGTGGTAAAAGAGGTTCTACGATTGCATCCACCCGCCCCACTTCTCCTTCCAAGAGAAACCATGTCCCATTTCAAGCTCAATGGTTACGATATTAATCGCAAGGCTCATCTACATGTCAATGTATGGGCTATAGGACGAGACCCGGGTTATTGGACGAACCCAGAAGAGTTCTTGCCTGAGAGATTTACAGGAAGCACTATCGATTACAAAGGGCAGAATTTTGAGTTATTACCGTTCGGAGCAGGTCGAAGAATCTGTCCTGGTATGAACATGGGGATTGTTACATTGGAGCTAGCATTGGCTAATCTATTGCTGCGATTTGATTGGAAATTGCCTGATGGAATGAAAATAGAAGATGTGGACATGAAAGAGGATGCTGGTCTAACAGTTGCAAAGAAATCTCCACTTAAGCTACTTCCAGTTGGCTACAAGGTTTAG 3069 42.0 MHNTIFMCVPLILLLSSLLFLKTNNKKNHVPPSPPKLPLLGHLHLISSLPHRSFYKLSKKHGPIMLLKLGSIPTIVISSAAAARDLFKLHDLASCSRPLLYGNGRLSYNYLDMSFSPYNDHWREVRKICAFELFNSYAVQSFQVIREQEVGLLLNSISRSLSSSTPVDLSEKSYSLTANTITRIAFGKIFRGGELDGENFQEVVRRAVAAMGYFCADFFPRIGWIIDWISGRRGRLDKTFAELDAFFQHLIDDCINFNGASHNEKNIVDVLLKLQTEHSVDCDGFKLTRDCIKALIMDIFLAGVDTGAGVIVWAMTELVKNPRVMKKLQNEIRNCIKEDQVKESELKKLQYLEMVLKEVLRLHPPVPLLLPRETISHFKLNGYDIDPKVHLYVNVWAIGRDANYWTNPEEFLPERFMGSDIDYIGQNFEFLPFGAGRRSCPGINMAITLVKLTLANLLLCFDWKLADGMKEEDLDMEEDDGLTVTKKSPLKLIPIEHLRTLEFEALIINQFNKNKTKMLNLDQIMHSHSIWVVSLFLLWSFLLLKTKTYNKKLPPGPPKLPLLGHLHLIGSLPHRSFNKLSQKYGPIMLLKLGSIPTIVISSAAAAKEVLQVHDLACCGRPRLAASARFSYNFLDIGLSPYTDHWKEVRKICVLELFSPRRVQSFQLIREEEVALLIMSFSQSSLLEVPVDLSEESYILTANITTRIAFGKSFRGSELDDGNFHQVIRRAIAALGSFSMSDFFPRVGWIIDRFSGVNGRLEKSFVELDAFLQQIVEDCINRVGTSHNEENIVDVLLKMEKYSSEPNTLQLTKDCIKAIIMDIFIAGVNPGAGTIIWAMTELVRNPRVMNKLQNDIRGCIKEDQVKENNLEKLQYLKMVVKEVLRLHPPAPLLLPRETMSHFKLNGYDINRKAHLHVNVWAIGRDPGYWTNPEEFLPERFTGSTIDYKGQNFELLPFGAGRRICPGMNMGIVTLELALANLLLRFDWKLPDGMKIEDVDMKEDAGLTVAKKSPLKLLPVGYKV 1022
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 41668565 41677382 - Sed0011785.1 Sed06g1698 718241
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1698 1022 PRINTS E-class P450 group I signature 699 717 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 581 600 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 876 894 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 605 626 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 963 986 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 953 963 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 917 941 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 814 831 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS E-class P450 group I signature 834 860 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 FunFam Cytochrome P450 83B1 18 493 - -
Sed06g1698 1022 SUPERFAMILY Cytochrome P450 554 1016 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 CDD CYP71-like 60 490 - -
Sed06g1698 1022 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 CDD CYP71-like 583 1013 - -
Sed06g1698 1022 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 Gene3D Cytochrome P450 543 1015 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 956 965 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed06g1698 1022 PANTHER CYTOCHROME P450 71B11-RELATED 533 1017 IPR050193 -
Sed06g1698 1022 Coils Coil 325 345 - -
Sed06g1698 1022 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 Pfam Cytochrome P450 554 1008 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed06g1698 1022 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed06g1698 1022 FunFam Cytochrome P450 83B1 541 1016 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0572 Sed-Chr4:4363078 Sed06g1698 Sed-Chr6:41668565 1.10E-81 dispersed
Sed06g1698 Sed-Chr6:41668565 Sed10g0893 Sed-Chr10:6759516 1.50E-196 dispersed
Sed06g1698 Sed-Chr6:41668565 Sed06g1699 Sed-Chr6:41683771 5.70E-188 tandem
Sed02g0336 Sed-Chr2:39847477 Sed06g1698 Sed-Chr6:41668565 9.90E-129 transposed
Sed05g2404 Sed-Chr5:36450220 Sed06g1698 Sed-Chr6:41668565 4.60E-150 transposed
Sed01g1607 Sed-Chr1:11686609 Sed06g1698 Sed-Chr6:41668565 6.50E-108 wgd
Sed04g0559 Sed-Chr4:4178928 Sed06g1698 Sed-Chr6:41668565 5.80E-141 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1698 - - - 0.0