Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1856 ATGGCCGCAACATTGCTCATTTTAGCCAGAATCTTTGCTCTACTTGCCGCCGTTCTGATCTCTATTTGGGCTCTTGTTTTCAGTTCTAGCTTCGGCCATCTTCCCCCTTCCCCAGATAACCGTATCTTCGATGTTCTTCATCCTTTGTTCATGGTGATTGGCCTCATTTTACTCAGTGGAGAAGCTATTTTGGTTCATAGTTGGTTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCATGGGCTGTCTTTGGCTTCTGGGATTTCTGGGGTTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTCTCTAATTTCCATAGTTTGCATTCTTGGTTGGGTTTGATCGTTATCACTTTGTTTGGAGCTCAGTGGATGATGGGATTTCTGAGCTTCTGGCATTGGAGGGAGGTTAGAGCAACAAGGGAAAAAGTGCTGCCATGGCACATATTCCTTGGGTTATACAGTTATGCATTGGCAGTGGCAGCAGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGGTGCAAACAAACAGAAATGTTCCTAAAAGGGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCTTGTCCTTGGCTTTGCTTTGTGGAATTGTGGTGCTTACTGCTATATCTCCCAAATATCCTCCTTCACTTCCCACCATCAAACAACAACCATTCTTCTCTAATTCAAAGTCCTTGCCTTCTTAA 717 44.35 MAATLLILARIFALLAAVLISIWALVFSSSFGHLPPSPDNRIFDVLHPLFMVIGLILLSGEAILVHSWLPGSRNLRKSVHLILHGLSLASGISGVWTKFHWDRGFFSNFHSLHSWLGLIVITLFGAQWMMGFLSFWHWREVRATREKVLPWHIFLGLYSYALAVAAAETGLLEKLTLVQTNRNVPKRGPEAMVVNSLGLSLALLCGIVVLTAISPKYPPSLPTIKQQPFFSNSKSLPS 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42955268 42958289 + Sed0026262.1 Sed06g1856 718399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1856 238 ProSiteProfiles Cytochrome b561 domain profile. 8 213 IPR006593 -
Sed06g1856 238 Pfam Eukaryotic cytochrome b561 46 176 IPR006593 -
Sed06g1856 238 PANTHER CYTOCHROME B561-RELATED 5 217 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
Sed06g1856 238 FunFam Cytochrome b reductase 1 1 220 - -
Sed06g1856 238 Gene3D - 1 218 - -
Sed06g1856 238 SMART 561_7 46 171 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0307 Sed-Chr3:1853501 Sed06g1856 Sed-Chr6:42955268 1.40E-44 dispersed
Sed06g1856 Sed-Chr6:42955268 Sed11g2091 Sed-Chr11:34837002 1.60E-40 dispersed
Sed06g1856 Sed-Chr6:42955268 Sed06g1857 Sed-Chr6:42955268 6.10E-109 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1856 K08360 - csv:101205948 395.201