Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed06g1856 | ATGGCCGCAACATTGCTCATTTTAGCCAGAATCTTTGCTCTACTTGCCGCCGTTCTGATCTCTATTTGGGCTCTTGTTTTCAGTTCTAGCTTCGGCCATCTTCCCCCTTCCCCAGATAACCGTATCTTCGATGTTCTTCATCCTTTGTTCATGGTGATTGGCCTCATTTTACTCAGTGGAGAAGCTATTTTGGTTCATAGTTGGTTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCATGGGCTGTCTTTGGCTTCTGGGATTTCTGGGGTTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTCTCTAATTTCCATAGTTTGCATTCTTGGTTGGGTTTGATCGTTATCACTTTGTTTGGAGCTCAGTGGATGATGGGATTTCTGAGCTTCTGGCATTGGAGGGAGGTTAGAGCAACAAGGGAAAAAGTGCTGCCATGGCACATATTCCTTGGGTTATACAGTTATGCATTGGCAGTGGCAGCAGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGGTGCAAACAAACAGAAATGTTCCTAAAAGGGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCTTGTCCTTGGCTTTGCTTTGTGGAATTGTGGTGCTTACTGCTATATCTCCCAAATATCCTCCTTCACTTCCCACCATCAAACAACAACCATTCTTCTCTAATTCAAAGTCCTTGCCTTCTTAA | 717 | 44.35 | MAATLLILARIFALLAAVLISIWALVFSSSFGHLPPSPDNRIFDVLHPLFMVIGLILLSGEAILVHSWLPGSRNLRKSVHLILHGLSLASGISGVWTKFHWDRGFFSNFHSLHSWLGLIVITLFGAQWMMGFLSFWHWREVRATREKVLPWHIFLGLYSYALAVAAAETGLLEKLTLVQTNRNVPKRGPEAMVVNSLGLSLALLCGIVVLTAISPKYPPSLPTIKQQPFFSNSKSLPS | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 42955268 | 42958289 | + | Sed0026262.1 | Sed06g1856 | 718399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed06g1856 | 238 | ProSiteProfiles | Cytochrome b561 domain profile. | 8 | 213 | IPR006593 | - | |
Sed06g1856 | 238 | Pfam | Eukaryotic cytochrome b561 | 46 | 176 | IPR006593 | - | |
Sed06g1856 | 238 | PANTHER | CYTOCHROME B561-RELATED | 5 | 217 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
Sed06g1856 | 238 | FunFam | Cytochrome b reductase 1 | 1 | 220 | - | - | |
Sed06g1856 | 238 | Gene3D | - | 1 | 218 | - | - | |
Sed06g1856 | 238 | SMART | 561_7 | 46 | 171 | IPR006593 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0307 | Sed-Chr3:1853501 | Sed06g1856 | Sed-Chr6:42955268 | 1.40E-44 | dispersed | |
Sed06g1856 | Sed-Chr6:42955268 | Sed11g2091 | Sed-Chr11:34837002 | 1.60E-40 | dispersed | |
Sed06g1856 | Sed-Chr6:42955268 | Sed06g1857 | Sed-Chr6:42955268 | 6.10E-109 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed06g1856 | K08360 | - | csv:101205948 | 395.201 |