Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g1857 ATGGGGTTTGGGTTTTTTGCTTTGCAGGTTCTTCATCCTTTGTTCATGGTGATTGGCCTCATTTTACTCAGTGGAGAAGCTATTTTGGTTCATAGTTGGTTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCATGGGCTGTCTTTGGCTTCTGGGATTTCTGGGGTTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTCTCTAATTTCCATAGTTTGCATTCTTGGTTGGGTTTGATCGTTATCACTTTGTTTGGAGCTCAGTGGATGATGGGATTTCTGAGCTTCTGGCATTGGAGGGAGGTTAGAGCAACAAGGGAAAAAGTGCTGCCATGGCACATATTCCTTGGGTTATACAGTTATGCATTGGCAGTGGCAGCAGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGGTGCAAACAAACAGAAATGTTCCTAAAAGGGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCTTGTCCTTGGCTTTGCTTTGTGGAATTGTGGTGCTTACTGCTATATCTCCCAAATATCCTCCTTCACTTCCCACCATCAAACAACAACCATTCTTCTCTAATTCAAAGTCCTTGCCTTCTTAA 612 43.63 MGFGFFALQVLHPLFMVIGLILLSGEAILVHSWLPGSRNLRKSVHLILHGLSLASGISGVWTKFHWDRGFFSNFHSLHSWLGLIVITLFGAQWMMGFLSFWHWREVRATREKVLPWHIFLGLYSYALAVAAAETGLLEKLTLVQTNRNVPKRGPEAMVVNSLGLSLALLCGIVVLTAISPKYPPSLPTIKQQPFFSNSKSLPS 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42955268 42958289 + Sed0026262.2 Sed06g1857 718400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g1857 203 ProSiteProfiles Cytochrome b561 domain profile. 1 178 IPR006593 -
Sed06g1857 203 SMART 561_7 11 136 IPR006593 -
Sed06g1857 203 Gene3D - 3 183 - -
Sed06g1857 203 PANTHER CYTOCHROME B561-RELATED 11 182 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
Sed06g1857 203 FunFam Cytochrome b reductase 1 5 185 - -
Sed06g1857 203 Pfam Eukaryotic cytochrome b561 11 141 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1857 Sed-Chr6:42955268 Sed11g2091 Sed-Chr11:34837002 1.80E-37 dispersed
Sed06g1856 Sed-Chr6:42955268 Sed06g1857 Sed-Chr6:42955268 6.10E-109 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g1857 K08360 - csv:101205948 348.591