Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g2056 ATGGCAGTGGCAGAAGCGAAGGTCCAACGGGTCGTTTTCACATCATCGATCGGAGCGGTATACATGAACCCGAATCGAAGCCCTGATACAGTAGTAGACGAGTCTTGCTGGAGTGACCTTGACTATTGCAAAAACAGCAAGAATTGGTATTGTTATTCTAAGACATTGGCAGAGCAAACAGCATGGGCAATGGCAAAGGAGAAAGGGGTGGATCTAGTGGTGGTCAACCCAATGTTGGTTCTTGGACCATTATTACAACAAACATTAAATTTGAGTGTACTTCATATAATGCAGTATTTGATTGGATATGCCAAGACATATACCAATGCTGTTCATGGTTATGTTCATGTCAAAGATGTTGCAAAAGCTCATCTTTTGTTTTACGAAACTCCTTCGGCTTTTGGTCGATATATTTGCGTCGAAAGTATGCTTCATCGCGAAGAATTGGTTGGAGTTTTGGCTGAGTTGTTTCCCGGGTATCCCATTCCTACCGAGTGCTCAGACCAGGTGAACCCTAAGAAAAAACCATACAAATATAGTGCCAAAAAGCTCAAAGACTTGGGCATGGAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTAAAGAGTCTTCAACATAAACATTACAATTTTAAGTCCATCAAATCTTCATTATGA 660 40.91 MAVAEAKVQRVVFTSSIGAVYMNPNRSPDTVVDESCWSDLDYCKNSKNWYCYSKTLAEQTAWAMAKEKGVDLVVVNPMLVLGPLLQQTLNLSVLHIMQYLIGYAKTYTNAVHGYVHVKDVAKAHLLFYETPSAFGRYICVESMLHREELVGVLAELFPGYPIPTECSDQVNPKKKPYKYSAKKLKDLGMEFIPVKQCIYETVKSLQHKHYNFKSIKSSL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44632552 44635097 - Sed0025139.1 Sed06g2056 718599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g2056 219 Pfam NAD dependent epimerase/dehydratase family 2 133 IPR001509 -
Sed06g2056 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 205 IPR036291 -
Sed06g2056 219 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 204 IPR050425 GO:0016616(PANTHER)
Sed06g2056 219 FunFam Dihydroflavonol reductase 2 212 - -
Sed06g2056 219 Gene3D - 1 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g2056 Sed-Chr6:44632552 Sed07g0750 Sed-Chr7:5602675 5.10E-86 dispersed
Sed06g2055 Sed-Chr6:44628048 Sed06g2056 Sed-Chr6:44632552 2.40E-95 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g2056 K09753 - csv:101219069 366.696