Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed06g2078 ATGCCGAAGTTGGTTTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGTTTGGCTGCTGCTGTTTGGGTTCAAATCGCTGGTGGTTCTTCTTATAACTTTTCTCTTTACTCTCACTTGCTTAAATCTGTTCTGGGTTTGAATCAGATGCAGCTTACAGTGCTTGGAGTGGCTAATGATATTGGGGAGAGTTTTGGGTTGATTCCTGGCCTTGCTTGTAATAGATTCCCTCCATGGATTGTGCTTTTGGTTGGTTCTGTTTGTTGCTTTGTGGGTTATGGAGCTATTTGGCTTGCTGTTAGTAGGACTGTCCCTAATCTGCCTTATTGGCTGCTATGGGTCACACATGTTATTGCTACTAATAGCAATGCATGGTTCGGAACAGCCGTGCTTGTAACAAACATGAGGAACTTCCCTCTAAGTAGGGGTACTGTTGCTGGCATCCTTAAAGGTTATGTCGGGCTTAGCGCTGCTGTATACACGGTAATATACAGCATGATTCTCAGAAAGTCTGCTCTGGATTTACTGTTGTTTCTTGCGATCGGGATACCCATTTTGACCATAGCTATGATGTACTTTGTTCGACCTTGTACTCCGGCTTCTACAGAGGATCCATCTGAGCGTAGCCATTTTCTTTTCACGCAAGCTGCTTGTGTTTTGCTAGCGGTCTTTCTAGTCTCGGCCACAATTTTAGATGCAACAACAACCCCTAGTAATGCGGTCGCATACACCTTGGTTGCCATTATGGTCATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTTCTGCAAAGACGAAAAAACTTGACCCTCAAGTTGACACGACTGAACCGTTGGCTTTAGGAGAAAGCGATTCCTCCCAAATGGAACCTTTATTGACACCATCTTCCTCAGCTACTAATCTTGGTAGTTTCTATGAGAATGATGATGCATCAGATGTAGAAACACTCCTTGCTGTGGGAGAGGGTGCGATTCATAAGAAGAAGAGAAGACCTAAACGAGGAGAAGATTTCAAGCTCCGTGAAGCCGTAATGAAGGCTGATTTTTGGCTGCTTTGGTTCTTGTACTTCCTTGGCGTCGGTCCAGGAATAACAGTTCTCAACAACTTGTCTCAAATCGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTTTGCAACTTTATTGGTCGTCTAGGCTCCGGCATTATTTCCGAACACTTCGTCAGGTCAAGAATGATACCTCGTTCGCTGTGGATGATGTTTGCACTAATAATCATGTCTATAGCATCCCTCCTGTATGCATCTGCCCTCACGGGTACTCTCTACGTCGCCACGGGTTTCACTGGACTCAGCTATGGCATTCTATATGCCACGATGGTCCCTCTTGCATCTGAGATTTTCGGCCTAAAAAATTTTGGAGTAATATTCAACTTCATGCAGCTGGTAAATCCAATTGGAGCAGTCCTTTTCTCGGTTCTCCTCGCCAGTACGTTATACGACAATGAAGCTGTTAAGCAAGGTTCGATAACCTGCATAGGCCAACAGTGCTTCAGAATGACATTTCTCATTCTTTCGGGCGTTGCTGGGTTAGGTTCAATCTTGTGCATAATTCTGACCATTAGATTAAGGCCAGTCTATCAAATGCTTTATTCTGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGCCATTGA 1701 44.56 MPKLVLKGGSRPPWVGLAAAVWVQIAGGSSYNFSLYSHLLKSVLGLNQMQLTVLGVANDIGESFGLIPGLACNRFPPWIVLLVGSVCCFVGYGAIWLAVSRTVPNLPYWLLWVTHVIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMILRKSALDLLLFLAIGIPILTIAMMYFVRPCTPASTEDPSERSHFLFTQAACVLLAVFLVSATILDATTTPSNAVAYTLVAIMVILLMSPLAVPIKMTICSAKTKKLDPQVDTTEPLALGESDSSQMEPLLTPSSSATNLGSFYENDDASDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVMKADFWLLWFLYFLGVGPGITVLNNLSQIGISLGVNDTTLLLALFSFCNFIGRLGSGIISEHFVRSRMIPRSLWMMFALIIMSIASLLYASALTGTLYVATGFTGLSYGILYATMVPLASEIFGLKNFGVIFNFMQLVNPIGAVLFSVLLASTLYDNEAVKQGSITCIGQQCFRMTFLILSGVAGLGSILCIILTIRLRPVYQMLYSGGSFRLPQSSGH 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44746004 44750495 + Sed0013738.1 Sed06g2078 718621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed06g2078 566 CDD MFS_Mch1p_like 12 534 - -
Sed06g2078 566 Pfam Nodulin-like 13 260 IPR010658 -
Sed06g2078 566 SUPERFAMILY MFS general substrate transporter 333 547 IPR036259 -
Sed06g2078 566 Gene3D MFS general substrate transporter like domains 347 549 IPR036259 -
Sed06g2078 566 Gene3D MFS general substrate transporter like domains 7 271 IPR036259 -
Sed06g2078 566 SUPERFAMILY MFS general substrate transporter 13 199 IPR036259 -
Sed06g2078 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 549 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g2078 Sed-Chr6:44746004 Sed11g2265 Sed-Chr11:35903390 1.50E-92 dispersed
Sed05g1417 Sed-Chr5:27577275 Sed06g2078 Sed-Chr6:44746004 1.90E-294 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed06g2078 - - - 0.0