Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0055 | ATGGTTTCAAAGAAAGTGAGAGATTCTCTCCCTCTAAAACTGTGTGCTCAGTTGGAATTGGATGCTACCAGTTATGAAGGACAAAATGATGCGATATGTCAAGTCTCTCCACCAACACTGATTTACACGAACTCTGAAACCTCTCATTGCGAACTTGGTGCTAGTCAGGGAAGTAACAATGACATTTATGCCATGAAAGAATCTTTTCTGAAGGCTTTTAAGGTGGTGGACAAGGAACTTAAACTACATCCATACATCGAATGCCATACCAGTGGTACAACATCAGTTGCTTTGGTAAAAAAGGGTCGGGATCTTATCATCGGAAATGTTGGGGACTCGAGGGCTGTATTAGGTACTAGAGATGAAGATAACTTTCTTGTTCCAGTTCAGTTGACTCTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAGAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTAAAAATGAGCCTGAGATTTTTCGGGTTTGGCTTCCCAACCGCGATTCTCCAGGTCTTGCTATGGCCAGATCCTTCGGAGATTTCTGTTTAAAAGACTTTGGCCTGATAGCCGTTCCTGACGTTTCTTGTTATCATCTTACTGAGAAAGATGAATTTGTTGTGCTTGCTACAGATGGAGTTTGGGATGTTCTCTCAAATGAGGAGGTTGTGGCAATTGTTGCATCTTCTCCGAGATCCTCTGCAGCCGGTACGCTTGTGGACTCGGCTAATCGAGCATGGAGATCGAAGTATCCTACCGCCAAGATGGATGATTGCACTGTAGTCTGTCTGTACCTGGACTCTAATGAAGAGTGTTAA | 825 | 43.64 | MVSKKVRDSLPLKLCAQLELDATSYEGQNDAICQVSPPTLIYTNSETSHCELGASQGSNNDIYAMKESFLKAFKVVDKELKLHPYIECHTSGTTSVALVKKGRDLIIGNVGDSRAVLGTRDEDNFLVPVQLTLDLKPNLPREAERIRLCKGRIFALKNEPEIFRVWLPNRDSPGLAMARSFGDFCLKDFGLIAVPDVSCYHLTEKDEFVVLATDGVWDVLSNEEVVAIVASSPRSSAAGTLVDSANRAWRSKYPTAKMDDCTVVCLYLDSNEEC | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 730525 | 734081 | + | Sed0027629.5 | Sed07g0055 | 718919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0055 | 274 | SMART | PP2C_4 | 2 | 266 | IPR001932 | - | |
Sed07g0055 | 274 | CDD | PP2Cc | 55 | 268 | IPR001932 | - | |
Sed07g0055 | 274 | Pfam | Protein phosphatase 2C | 59 | 235 | IPR001932 | - | |
Sed07g0055 | 274 | SUPERFAMILY | PP2C-like | 60 | 270 | IPR036457 | - | |
Sed07g0055 | 274 | PANTHER | PROTEIN PHOSPHATASE | 2 | 266 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed07g0055 | 274 | Gene3D | - | 1 | 273 | IPR036457 | - | |
Sed07g0055 | 274 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 268 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g0055 | Sed-Chr7:730525 | Sed09g0429 | Sed-Chr9:4325155 | 1.50E-122 | dispersed | |
Sed07g0054 | Sed-Chr7:730525 | Sed07g0055 | Sed-Chr7:730525 | 3.70E-158 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0055 | - | - | - | 0.0 |