Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g0153 | ATGGAAGCCAGAAGCTATTTCCCACTGTTCATCACTTTCGTGGCTTTGATTTCCTTTCTGTTGATACAGAAACGAAAATCCAAAGCAAAGAATCTCCCACCCAGTCCTCTGTCACTGCCTGTAATCGGCCATCTCCATCTTCTGAAACACCCGATCCACCGAACCCTAAATTCCCTCTCCCAGAAACACGGCCCCATTTTCACCCTCCGCCTCGGCGCCCGCCACCTCGTCGTCGTCTCCTCCACCGCCGCCGTCCAGGAATGCTTCACCACCAACGACGTTGTTTTCGCCAACCGCCCCGAATTCATCTCCGGCAAGTACCTCAGCTACGGCAACTCCACCCTCGGCGCCGCCCCCTACGGCGACCACTGGCGCAATCTCCGCCGCCTCAGCGCCACCGAAGTCCTCTCCTCCATTCGCCTCAATGCGTCGGCCGGAATCCGGCGCGAAGAGGTCGATATTCTACTCAGGAAACTCCATCGAGCTTCGAGTAGGGATTTCGGGAAGGTGAAGATGAAGTCGGTGTTGTCGGAGCTGACGTTTAACATCATAATGAGAATGGTGGCCGGAAAACGGTATTACGGGGATGAGGTGACGGAGTTGGAAGAGGCGGCGAAGTTCAGGGAGATAATGGAGAAGGCGTTTCAGTTGGGGTCTTATCCTGGGGATTTCTTGCCATTTTTGAGTTGGGTTGATTGGAGTTACACCAAACGAGTGGAGGCTTTGGGGAGAGATACAGATTTTTTCTTGCAGAATTTGTTGGATGAACATAGAAGAGGTTTGCAAAAAGGGAACAACATGAATACCATGATTTCCCATTTGCTCTGTTTGCAGGAATCTCAGCCTGATTACTACACTGATGAAATTATCAAAGGCCTTGTTGTTACGATTTTATCAGCTGCAACGGAAACATCATCGGTGACGATAGAGTGGGCAATGGCGAATCTACTCAACCATCCAGAAGCCTTAAACAAGGTCAGAGACGAACTCGACACAAAAATCGGACAAGAGCGGTTCCTAGAAGAAGAAGAGATTCTCAATTTACCATACCTTCAAAACTGTATTTCTGAAACTCTACGCCTATATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCAGCCAGTTGTTCGTTAGGAGGATATCACATCCCTCCAGACACTATCTTAATGGTCAATGCATGGGCCATTCAAAGGGACCCCAAAGTCTGGGATGACCCAACTAGCTTTAAACCGGAGAGGTTCGAAAGTGGTGCGGAGTCGAGCACCAATGCATACAAATACTTGCCATTTGGCTTGGGCCGGAGGGCTTGCCCTGGGATGGGCATGGCTAACCGCGTGGTGGGCTTGGCTTTGGGTTCGTTGATTCAGGGGTTCGAGTGGAAGAGGGTGGACGATAAGGAAATCGACATGACGGAAGGCCAAGGGATTTCGATGCCTAAAGTCGAGCCACTGGAAGCATTGTGTAGAGCTCGCCCCATCATGGAAAGCATTGCTTCTGATACCACAACCAACCTTTAA | 1521 | 50.36 | MEARSYFPLFITFVALISFLLIQKRKSKAKNLPPSPLSLPVIGHLHLLKHPIHRTLNSLSQKHGPIFTLRLGARHLVVVSSTAAVQECFTTNDVVFANRPEFISGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNASAGIRREEVDILLRKLHRASSRDFGKVKMKSVLSELTFNIIMRMVAGKRYYGDEVTELEEAAKFREIMEKAFQLGSYPGDFLPFLSWVDWSYTKRVEALGRDTDFFLQNLLDEHRRGLQKGNNMNTMISHLLCLQESQPDYYTDEIIKGLVVTILSAATETSSVTIEWAMANLLNHPEALNKVRDELDTKIGQERFLEEEEILNLPYLQNCISETLRLYPAAPLLAPHLSSASCSLGGYHIPPDTILMVNAWAIQRDPKVWDDPTSFKPERFESGAESSTNAYKYLPFGLGRRACPGMGMANRVVGLALGSLIQGFEWKRVDDKEIDMTEGQGISMPKVEPLEALCRARPIMESIASDTTTNL | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1388970 | 1392181 | - | Sed0007689.1 | Sed07g0153 | 719017 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g0153 | 506 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | FunFam | Cytochrome P450 family protein | 23 | 495 | - | - | |
| Sed07g0153 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed07g0153 | 506 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 492 | IPR050651 | - | |
| Sed07g0153 | 506 | Pfam | Cytochrome P450 | 33 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | SUPERFAMILY | Cytochrome P450 | 33 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | CDD | CYP81 | 64 | 485 | - | - | |
| Sed07g0153 | 506 | Gene3D | Cytochrome P450 | 18 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0153 | 506 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed07g0153 | Sed-Chr7:1388970 | Sed10g0675 | Sed-Chr10:4665286 | 1.50E-157 | dispersed | |
| Sed07g0153 | Sed-Chr7:1388970 | Sed07g0154 | Sed-Chr7:1396864 | 9.50E-160 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g0153 | K13260 | - | csv:101207828 | 809.675 |