Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0153 ATGGAAGCCAGAAGCTATTTCCCACTGTTCATCACTTTCGTGGCTTTGATTTCCTTTCTGTTGATACAGAAACGAAAATCCAAAGCAAAGAATCTCCCACCCAGTCCTCTGTCACTGCCTGTAATCGGCCATCTCCATCTTCTGAAACACCCGATCCACCGAACCCTAAATTCCCTCTCCCAGAAACACGGCCCCATTTTCACCCTCCGCCTCGGCGCCCGCCACCTCGTCGTCGTCTCCTCCACCGCCGCCGTCCAGGAATGCTTCACCACCAACGACGTTGTTTTCGCCAACCGCCCCGAATTCATCTCCGGCAAGTACCTCAGCTACGGCAACTCCACCCTCGGCGCCGCCCCCTACGGCGACCACTGGCGCAATCTCCGCCGCCTCAGCGCCACCGAAGTCCTCTCCTCCATTCGCCTCAATGCGTCGGCCGGAATCCGGCGCGAAGAGGTCGATATTCTACTCAGGAAACTCCATCGAGCTTCGAGTAGGGATTTCGGGAAGGTGAAGATGAAGTCGGTGTTGTCGGAGCTGACGTTTAACATCATAATGAGAATGGTGGCCGGAAAACGGTATTACGGGGATGAGGTGACGGAGTTGGAAGAGGCGGCGAAGTTCAGGGAGATAATGGAGAAGGCGTTTCAGTTGGGGTCTTATCCTGGGGATTTCTTGCCATTTTTGAGTTGGGTTGATTGGAGTTACACCAAACGAGTGGAGGCTTTGGGGAGAGATACAGATTTTTTCTTGCAGAATTTGTTGGATGAACATAGAAGAGGTTTGCAAAAAGGGAACAACATGAATACCATGATTTCCCATTTGCTCTGTTTGCAGGAATCTCAGCCTGATTACTACACTGATGAAATTATCAAAGGCCTTGTTGTTACGATTTTATCAGCTGCAACGGAAACATCATCGGTGACGATAGAGTGGGCAATGGCGAATCTACTCAACCATCCAGAAGCCTTAAACAAGGTCAGAGACGAACTCGACACAAAAATCGGACAAGAGCGGTTCCTAGAAGAAGAAGAGATTCTCAATTTACCATACCTTCAAAACTGTATTTCTGAAACTCTACGCCTATATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCAGCCAGTTGTTCGTTAGGAGGATATCACATCCCTCCAGACACTATCTTAATGGTCAATGCATGGGCCATTCAAAGGGACCCCAAAGTCTGGGATGACCCAACTAGCTTTAAACCGGAGAGGTTCGAAAGTGGTGCGGAGTCGAGCACCAATGCATACAAATACTTGCCATTTGGCTTGGGCCGGAGGGCTTGCCCTGGGATGGGCATGGCTAACCGCGTGGTGGGCTTGGCTTTGGGTTCGTTGATTCAGGGGTTCGAGTGGAAGAGGGTGGACGATAAGGAAATCGACATGACGGAAGGCCAAGGGATTTCGATGCCTAAAGTCGAGCCACTGGAAGCATTGTGTAGAGCTCGCCCCATCATGGAAAGCATTGCTTCTGATACCACAACCAACCTTTAA 1521 50.36 MEARSYFPLFITFVALISFLLIQKRKSKAKNLPPSPLSLPVIGHLHLLKHPIHRTLNSLSQKHGPIFTLRLGARHLVVVSSTAAVQECFTTNDVVFANRPEFISGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNASAGIRREEVDILLRKLHRASSRDFGKVKMKSVLSELTFNIIMRMVAGKRYYGDEVTELEEAAKFREIMEKAFQLGSYPGDFLPFLSWVDWSYTKRVEALGRDTDFFLQNLLDEHRRGLQKGNNMNTMISHLLCLQESQPDYYTDEIIKGLVVTILSAATETSSVTIEWAMANLLNHPEALNKVRDELDTKIGQERFLEEEEILNLPYLQNCISETLRLYPAAPLLAPHLSSASCSLGGYHIPPDTILMVNAWAIQRDPKVWDDPTSFKPERFESGAESSTNAYKYLPFGLGRRACPGMGMANRVVGLALGSLIQGFEWKRVDDKEIDMTEGQGISMPKVEPLEALCRARPIMESIASDTTTNL 506
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1388970 1392181 - Sed0007689.1 Sed07g0153 719017
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0153 506 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 FunFam Cytochrome P450 family protein 23 495 - -
Sed07g0153 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed07g0153 506 PANTHER CYTOCHROME P450 82C3-RELATED 13 492 IPR050651 -
Sed07g0153 506 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 CDD CYP81 64 485 - -
Sed07g0153 506 Gene3D Cytochrome P450 18 490 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0153 506 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0153 Sed-Chr7:1388970 Sed10g0675 Sed-Chr10:4665286 1.50E-157 dispersed
Sed07g0153 Sed-Chr7:1388970 Sed07g0154 Sed-Chr7:1396864 9.50E-160 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0153 K13260 - csv:101207828 809.675