Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g0154 | ATGGAAGCCTCCATCTTCCTGTATTCACTTCTCACTATCATTCTCATCAGTGCAATTTACCATGTACTAAAACCTAAATCCCACAAAAACCTCCCTCCATCGCCGCCGTCGATTCCGATCATCGGCCACCTCCATCTTCTCAAACCCCCAGTTCACAGAAGCTTATTAACTCTGTCACAAAAACACGGCCCTGTTTTCTCCCTCCGATTCGGTTCCCGCCTTGTCATCGTTGTCTCCTCCATTGCCGCCACCGATGAATGCTTCACCAAAAACGACATCGTCTTCGCCAACCGCCCCGACTTTGCGGTGAGCCGTTGCCTTAGTTACAACCACACCACCCTTGGTGCTGCCCCATACGGCGACCACTGGAGGAAGCTCCGCCGCGTGTGCGCGCTCGAAATCCTCTCTGCAAATCGTCTAAACACAAATGCCGCCATCCGAATCGACGAAGTCAAGTCCCTAGCAAAGAAACTGGAAATGAATTCAAGAAATGGATATGCAAAGGTTCAGTTTAAATCGATGGTGAAGGAGTTGACGATGAATATAACAATGAGGATGGTCGCCGGAAAGCGGTATTACGGGGAGGAGGAAGTGTCGGAGGAGGGCGGTGAAGCGGCAGCGTTTCGAGAGATTATTGATGAGTTATTCGAGTTCACATTGTCACAATACCCTGCTGATTTTTTGCCCATTTTGAAGTATATTGATTTGAACGGGTTTATGAGGAGAGCGAAGAAGCTTATTAAGAAGGTGGATTCGTTTTGGCAAGGGATGATTGATGAGCATAGAATGAATATAATTTGTAATGAAGAAATGAAGAACAGCATGGTTGCTCATTTTCTTAAGTTGCAGGAATCACAGCCTGAATATTATACTGATGATATTATCAAAGGCCTCATTCTGACAATGATACTCGGTGGCTCAGACACCACAGCGGTGACAATAGAATGGGCAATGGCAAATCTCCTAAATTATCCATCAGTATTAAAGAAGGCAAGAGATGAACTAGAGTCTCAACTTGGAGATCAATTATGTGAAGAATCCGACATTTCGAAATTGAGCTATCTTCGATGCATAGTTCTTGAAACTCTTCGGTTGTACCCGGCAGGCCCGCTCCTACTACCACATAGGTCATCTGCCGACTGTACTATATCAGGATACGATGTTCCACGTGACACGATCTTATTGGTCAACGCATGGGCCATCCACAGGGACCCGACATTGTGGGATGACCCAACTAGTTTTACACCAGAGAGATTTGAGAGTGGAGAAGGAGATGCAAACAGTAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGCCCAGGGTCAGGAATGGCACATAGAGTGTTGGGAATGACTTTAGGACTATTGATACAATGTTTTGATTGGAAGAGAATTGAAGGGAAGGAAATTGATATGATGGAAGGAAAAGGTATTAGCATGCCTAAAGCTCAACCACTTGAAGCACTTTGCAAACCAAGAGAAATTGCTACCAAGTTGCTTTGA | 1509 | 45.26 | MEASIFLYSLLTIILISAIYHVLKPKSHKNLPPSPPSIPIIGHLHLLKPPVHRSLLTLSQKHGPVFSLRFGSRLVIVVSSIAATDECFTKNDIVFANRPDFAVSRCLSYNHTTLGAAPYGDHWRKLRRVCALEILSANRLNTNAAIRIDEVKSLAKKLEMNSRNGYAKVQFKSMVKELTMNITMRMVAGKRYYGEEEVSEEGGEAAAFREIIDELFEFTLSQYPADFLPILKYIDLNGFMRRAKKLIKKVDSFWQGMIDEHRMNIICNEEMKNSMVAHFLKLQESQPEYYTDDIIKGLILTMILGGSDTTAVTIEWAMANLLNYPSVLKKARDELESQLGDQLCEESDISKLSYLRCIVLETLRLYPAGPLLLPHRSSADCTISGYDVPRDTILLVNAWAIHRDPTLWDDPTSFTPERFESGEGDANSKLMIAFGLGRRACPGSGMAHRVLGMTLGLLIQCFDWKRIEGKEIDMMEGKGISMPKAQPLEALCKPREIATKLL | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1396864 | 1399074 | + | Sed0024368.1 | Sed07g0154 | 719018 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g0154 | 502 | CDD | CYP81 | 63 | 488 | - | - | |
| Sed07g0154 | 502 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | P450 superfamily signature | 441 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 495 | IPR050651 | - | |
| Sed07g0154 | 502 | Pfam | Cytochrome P450 | 32 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | SUPERFAMILY | Cytochrome P450 | 32 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | FunFam | Cytochrome P450 family protein | 23 | 498 | - | - | |
| Sed07g0154 | 502 | Gene3D | Cytochrome P450 | 24 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g0154 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed07g0154 | Sed-Chr7:1396864 | Sed10g0673 | Sed-Chr10:4644986 | 4.40E-157 | dispersed | |
| Sed07g0153 | Sed-Chr7:1388970 | Sed07g0154 | Sed-Chr7:1396864 | 9.50E-160 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g0154 | K13260 | - | csv:101208069 | 748.814 |