Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0154 ATGGAAGCCTCCATCTTCCTGTATTCACTTCTCACTATCATTCTCATCAGTGCAATTTACCATGTACTAAAACCTAAATCCCACAAAAACCTCCCTCCATCGCCGCCGTCGATTCCGATCATCGGCCACCTCCATCTTCTCAAACCCCCAGTTCACAGAAGCTTATTAACTCTGTCACAAAAACACGGCCCTGTTTTCTCCCTCCGATTCGGTTCCCGCCTTGTCATCGTTGTCTCCTCCATTGCCGCCACCGATGAATGCTTCACCAAAAACGACATCGTCTTCGCCAACCGCCCCGACTTTGCGGTGAGCCGTTGCCTTAGTTACAACCACACCACCCTTGGTGCTGCCCCATACGGCGACCACTGGAGGAAGCTCCGCCGCGTGTGCGCGCTCGAAATCCTCTCTGCAAATCGTCTAAACACAAATGCCGCCATCCGAATCGACGAAGTCAAGTCCCTAGCAAAGAAACTGGAAATGAATTCAAGAAATGGATATGCAAAGGTTCAGTTTAAATCGATGGTGAAGGAGTTGACGATGAATATAACAATGAGGATGGTCGCCGGAAAGCGGTATTACGGGGAGGAGGAAGTGTCGGAGGAGGGCGGTGAAGCGGCAGCGTTTCGAGAGATTATTGATGAGTTATTCGAGTTCACATTGTCACAATACCCTGCTGATTTTTTGCCCATTTTGAAGTATATTGATTTGAACGGGTTTATGAGGAGAGCGAAGAAGCTTATTAAGAAGGTGGATTCGTTTTGGCAAGGGATGATTGATGAGCATAGAATGAATATAATTTGTAATGAAGAAATGAAGAACAGCATGGTTGCTCATTTTCTTAAGTTGCAGGAATCACAGCCTGAATATTATACTGATGATATTATCAAAGGCCTCATTCTGACAATGATACTCGGTGGCTCAGACACCACAGCGGTGACAATAGAATGGGCAATGGCAAATCTCCTAAATTATCCATCAGTATTAAAGAAGGCAAGAGATGAACTAGAGTCTCAACTTGGAGATCAATTATGTGAAGAATCCGACATTTCGAAATTGAGCTATCTTCGATGCATAGTTCTTGAAACTCTTCGGTTGTACCCGGCAGGCCCGCTCCTACTACCACATAGGTCATCTGCCGACTGTACTATATCAGGATACGATGTTCCACGTGACACGATCTTATTGGTCAACGCATGGGCCATCCACAGGGACCCGACATTGTGGGATGACCCAACTAGTTTTACACCAGAGAGATTTGAGAGTGGAGAAGGAGATGCAAACAGTAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGCCCAGGGTCAGGAATGGCACATAGAGTGTTGGGAATGACTTTAGGACTATTGATACAATGTTTTGATTGGAAGAGAATTGAAGGGAAGGAAATTGATATGATGGAAGGAAAAGGTATTAGCATGCCTAAAGCTCAACCACTTGAAGCACTTTGCAAACCAAGAGAAATTGCTACCAAGTTGCTTTGA 1509 45.26 MEASIFLYSLLTIILISAIYHVLKPKSHKNLPPSPPSIPIIGHLHLLKPPVHRSLLTLSQKHGPVFSLRFGSRLVIVVSSIAATDECFTKNDIVFANRPDFAVSRCLSYNHTTLGAAPYGDHWRKLRRVCALEILSANRLNTNAAIRIDEVKSLAKKLEMNSRNGYAKVQFKSMVKELTMNITMRMVAGKRYYGEEEVSEEGGEAAAFREIIDELFEFTLSQYPADFLPILKYIDLNGFMRRAKKLIKKVDSFWQGMIDEHRMNIICNEEMKNSMVAHFLKLQESQPEYYTDDIIKGLILTMILGGSDTTAVTIEWAMANLLNYPSVLKKARDELESQLGDQLCEESDISKLSYLRCIVLETLRLYPAGPLLLPHRSSADCTISGYDVPRDTILLVNAWAIHRDPTLWDDPTSFTPERFESGEGDANSKLMIAFGLGRRACPGSGMAHRVLGMTLGLLIQCFDWKRIEGKEIDMMEGKGISMPKAQPLEALCKPREIATKLL 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1396864 1399074 + Sed0024368.1 Sed07g0154 719018
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0154 502 CDD CYP81 63 488 - -
Sed07g0154 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PANTHER CYTOCHROME P450 82C3-RELATED 15 495 IPR050651 -
Sed07g0154 502 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 FunFam Cytochrome P450 family protein 23 498 - -
Sed07g0154 502 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g0154 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0154 Sed-Chr7:1396864 Sed10g0673 Sed-Chr10:4644986 4.40E-157 dispersed
Sed07g0153 Sed-Chr7:1388970 Sed07g0154 Sed-Chr7:1396864 9.50E-160 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0154 K13260 - csv:101208069 748.814