Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0261 ATGTCTCGAACGCCGAATCATGAGTTCCAAGAATGGTGGAACAAGCAGAGAGAAAGGAACAATGGCGAACTCTCAGTGGAGAAGTTCGATAACTTCTCCACCTCGCCGGCATTTCTATCCGTGGAGATCCCGGCAGATCGGACGGCGGATGAGGACCGGGCGAGGACCAGGAGTGCCCGCCAGATTTCTTGGGTTTGGCTGTTGAAGTTCCAGCAGATTGCTGGTTCTTTCGCTTCCATTACCAATGGCGTCGTTTATCTCATCCGAACCGCCAATCGTCGGATCTCGTCGCCCGATTCGCCTGCTGATTCGGCCTCGTCTCGGCTCTATAGGGTTATCAAAGTTTTCTTGATTGTAGTGATTCTGTTGCTTGTTTTTGAGCTTGTGGCCTACTTCAATGGCTGGCATTTTAGTCCCCCTTCTGTTAGTTTGGCTTCGGCGGAGGTGCTTGGAATGATAGGGTTTATTTATGCTCATTGGCTTGGGATTAGGACATTTTACTTGGCTCCACCGTTGCAGATCTTGATCAATGTATGCATTGTGTTGTTCCTGATCCAGTCTGTGGATCGTTTGGTTTTGATGCTGGGGTGTTTTTGGATCAAATTCCGGGGATTGAAGCCCGTGGCGCCATTTGAGTACTCGGCAGCCGGCCATGAGAATGGTGTTATTCCTGAGGATTATCCAATGGTGTTGGTACAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAACAATCTATTGCAGCTGTTTGTATCCAGGACTGGCCAAAGGACAAAATGCTTGTGCAAGTTTTAGATGATTCTGATGAGCTAGATGTACAACAACTTATCAAAGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGCATATTGTATCGACACCGCCTCATACGTACAGGCTACAAGGCAGGGAATCTCAAATCGGCTATGGGGTGCGATTATGTAAAAGATTTTGAGTTTGTGGCAATCTTTGATGCAGATTTTCAGCCAGGACCAGACTTTTTAAAGAAAACTATTCCACATTTCAAGGGGAATGATGAACTTGCATTGGTCCAAACGAGGTGGTCATTTGTGAACAAGGACGAAAACTTGCTCACAAGATTGCAGAACATAAATTTAGCCTTCCATTTTGAGGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGAACTGCTGGAGTTTGGAGAATTAAAGCTCTGGAAGATTGTGGGGGCTGGTTAGAAAGAACAACTGTTGAGGACATGGATATTGCTGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATCTATCTAAATGATGTGAAGTGCCTTTGTGAACTTCCAGAATCATATGAAGCATACAAGAAACAACAACACCGCTGGCATTCAGGCCCAATGCAGTTATTTCGTTTGTGCTTCTCTGATATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGTTAATTTGATTTTTCTTTTCTTCCTCTTGAGAAAGCTCGTCCTTCCCTTTTATTCCTTTACATTATTTTGCATAATTCTCCCCTTGACCATGTTCCTACCAGAAGCTCATCTACCAGCTTGGGTTGTTTGCTATGTTCCCGGACTCATGTCCATCTTAAATATTCTCCCTTCGCCGCAGTCGTTTCCGTTTATCGTCCCCTATCTTCTATTTGAAAACACCATGTCTGTTACCAAATTCAATGCTATGATTTTGGGGTTATTCCGCTTTAGAAGTTCTTATGAATGGATAGTAACGAAAAAACTGGGACGATCATCCGAAAACGATCTTGTTGCTTATGAAAAAGAACAAGAACCTCTAGTTGAAAGTACAACTCTTCATCGATCGTCCTCAGAATCAGGTCTTCATGAACTGACCAAGCTCGAGATATCGAAAAAAGCAGGGAAAAGCAGAAGAAATCGGCTGTACAGGAAGGAATTGGCTCTTGCAATCATTTTGTTAACTGCGTCCGCTAGAAGTTTGTTATCTGCTCAAGGAATTCACTTCTACTTCCTATTGTTTCAAGGTATCACTTTTCTAGTAGTCGGTCTCGATTTAATTGGAGAGCAGGTCAGTTAA 2073 43.66 MSRTPNHEFQEWWNKQRERNNGELSVEKFDNFSTSPAFLSVEIPADRTADEDRARTRSARQISWVWLLKFQQIAGSFASITNGVVYLIRTANRRISSPDSPADSASSRLYRVIKVFLIVVILLLVFELVAYFNGWHFSPPSVSLASAEVLGMIGFIYAHWLGIRTFYLAPPLQILINVCIVLFLIQSVDRLVLMLGCFWIKFRGLKPVAPFEYSAAGHENGVIPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDFEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLAFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKVNLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGLMSILNILPSPQSFPFIVPYLLFENTMSVTKFNAMILGLFRFRSSYEWIVTKKLGRSSENDLVAYEKEQEPLVESTTLHRSSSESGLHELTKLEISKKAGKSRRNRLYRKELALAIILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2107190 2112767 + Sed0022145.1 Sed07g0261 719125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0261 690 Pfam Glycosyl transferase family group 2 322 524 IPR001173 -
Sed07g0261 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 446 IPR029044 -
Sed07g0261 690 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 154 689 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Sed07g0261 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 506 IPR029044 -
Sed07g0261 690 FunFam probable xyloglucan glycosyltransferase 5 221 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0261 Sed-Chr7:2107190 Sed11g1870 Sed-Chr11:33295111 1.00E-244 dispersed
Sed07g0261 Sed-Chr7:2107190 Sed09g0998 Sed-Chr9:32853630 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0261 - - - 0.0