Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0262 | ATGGATGATGATTTTGATATCCCTGCGGCGGCTGACATGAACGAGGATTTGGATCTTCCAGATGAAACCGTTGCTCTCAAAGTTGGAGAGGAGAAAGAAATTGGGAATCAAGGGTTGAAGAAGAAGCTTTTGAAGGAGGGTGAAGGATGGGTCACTCCTGAAAATGGCAATGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTCGATTCCAGCCGTGATCGTGGAACCCCATTTAAGTTCACTCTTGGCCAAGGGCAAGTGATTAAAGGATGGGATCTGGGTATCAAAACAATGAAGAAAAGTGAAAAAGCCCTTTTTACCATTCCTTCTGAGCTTGCCTATGGTGAATCTGGCTCGCCACCAACCATTCCTCCTAGTGCTACATTGCAGTTCGATGTCGAGCTACTATCTTGGTCAAGTGTGAAAGACATATGCAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGAACAAATGGGAAAATCCGAAGGACCTTGATGAAGTGCTAGTTAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGCTGTAAAAACCATGAAGCTAGGAGAAAAGGCGCTCCTCTCGGTGAAACCACAATATGGGTTTGGGGAGAAAGGTAAATCAGCCTCTAGCAATGAAGGTGCAGTTCCACCAAATGCATCTCTAGATATTACTTTAGAGTTGGTATCTTGGAAGACTGTTTCAGAAGTTACCCCTGACAAAAAGGTTATCAAGAAAATTTTGAAAGAAGGAGAAGGGTATGAGAAGCCAAACGAAGGAGCTGTTGTTAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCACAATATTCTTGAAGAAGGGACATGATGATGAACAAGTGATTGATGGCCTCGACAAAGCTGTTGCAACAATGAAGAAAGGCGAGACAGCCCTGCTGACAATATCAACAGAGTATGCTTTTGGTTCATCCGAGTCACAACAGGAGTCAGCCGTAGTTCCTCCAAACTCGACTGTGTATTATGAAGTTGAACTGGTGGCTTTTGACAAGGAAAAAGAATCATGGGATATGAGTAACCAGGAAAAGATTGAAGCTGCTGGCAAAAAGAAGGAAGAAGGAAATGTGTTGTTTAAGGCTGGGAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATGTGACTCTTCATTAAGCGAAGAAGAGAAAAAGCAAGCAAAGGCATTGAAAGTTGCATGCAATTTGAACAATGCAGCTTGTAAATTGAAGCTAAAGCTGTACAAAGAGGCAGAGAAATTGTGCACCAAGGTACTGGAACTCGAAAGTTCAAATGGTAAGGCTCTCTATAGAAGAGCTCAAGCATACATCCAACTAGCTGATTTGGATTTGGCTGAATTCGACATCAAGAAAGCTCTCGATATCGATCCGAATAACAGGGATGTGAAATTGGAGTACAAAACTCTAAAGGAGAAGATGAAGGAATACAACAAAAAAGATGCCAAGTTCTACGGCAACATGTTTGCTAAAATGAAGAAATTAGAATCGTTTGACAAAAATAAAGAATGA | 1608 | 41.67 | MDDDFDIPAAADMNEDLDLPDETVALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGNEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKSEKALFTIPSELAYGESGSPPTIPPSATLQFDVELLSWSSVKDICKDGGIFKKILTEGNKWENPKDLDEVLVNFEAKLEDGTLVAKADGVEFTAVKTMKLGEKALLSVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKTVSEVTPDKKVIKKILKEGEGYEKPNEGAVVKVKLIGKLGDGTIFLKKGHDDEQVIDGLDKAVATMKKGETALLTISTEYAFGSSESQQESAVVPPNSTVYYEVELVAFDKEKESWDMSNQEKIEAAGKKKEEGNVLFKAGKFARASKRYEKAVKFIECDSSLSEEEKKQAKALKVACNLNNAACKLKLKLYKEAEKLCTKVLELESSNGKALYRRAQAYIQLADLDLAEFDIKKALDIDPNNRDVKLEYKTLKEKMKEYNKKDAKFYGNMFAKMKKLESFDKNKE | 535 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2113099 | 2122781 | - | Sed0025920.1 | Sed07g0262 | 719126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0262 | 535 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 156 | 249 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | Gene3D | - | 249 | 364 | IPR046357 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | SUPERFAMILY | FKBP-like | 32 | 148 | - | - | |
Sed07g0262 | 535 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 277 | 359 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 271 | 356 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 168 | 245 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 51 | 141 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | FunFam | Peptidylprolyl isomerase | 250 | 361 | - | - | |
Sed07g0262 | 535 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | SUPERFAMILY | TPR-like | 364 | 524 | IPR011990 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | SUPERFAMILY | FKBP-like | 148 | 252 | - | - | |
Sed07g0262 | 535 | ProSiteProfiles | TPR repeat profile. | 459 | 492 | IPR019734 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | Coils | Coil | 492 | 512 | - | - | |
Sed07g0262 | 535 | SMART | tpr_5 | 425 | 458 | IPR019734 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | SMART | tpr_5 | 459 | 492 | IPR019734 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | SMART | tpr_5 | 376 | 409 | IPR019734 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | Gene3D | - | 148 | 248 | IPR046357 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | SUPERFAMILY | FKBP-like | 252 | 376 | - | - | |
Sed07g0262 | 535 | Gene3D | Tetratricopeptide repeat domain | 365 | 519 | IPR011990 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | Gene3D | - | 29 | 147 | IPR046357 | GO:0003755(InterPro) | |
Sed07g0262 | 535 | Pfam | Tetratricopeptide repeat | 460 | 492 | IPR019734 | GO:0005515(InterPro) | |
Sed07g0262 | 535 | FunFam | Peptidylprolyl isomerase | 364 | 519 | - | - | |
Sed07g0262 | 535 | FunFam | Peptidylprolyl isomerase | 29 | 147 | - | - | |
Sed07g0262 | 535 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 31 | 142 | IPR050754 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g2534 | Sed-Chr4:38176666 | Sed07g0262 | Sed-Chr7:2113099 | 2.10E-31 | dispersed | |
Sed05g1336 | Sed-Chr5:26074882 | Sed07g0262 | Sed-Chr7:2113099 | 6.10E-31 | dispersed | |
Sed07g0262 | Sed-Chr7:2113099 | Sed11g2219 | Sed-Chr11:35748045 | 4.50E-19 | dispersed | |
Sed12g0549 | Sed-Chr12:3353036 | Sed07g0262 | Sed-Chr7:2113099 | 1.40E-09 | transposed | |
Sed07g0262 | Sed-Chr7:2113099 | Sed09g0999 | Sed-Chr9:32865455 | 7.20E-275 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0262 | K09571 | - | csv:101214513 | 904.434 |