Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0332 ATGGCGAGTGTGATCAAAGTCCACGGAATCCCAATTTCCACAGCCACATGCAGAGTTCTAGCCGTCCTCTACGAGAAGGACCTTCAATTCGAGCTCGTTGATGTCAAAATGCACGAAGAAGAACACAAGCGCGAACCCTTCCTCTCCATCAATCCTTTTGCTCAAGTTCCCGGGTTCCAAGATGGTGATCTGACGCTTTTTGAATCGAGGGCAATTACGCGGTACCTCACGGGAAATTATGCCGGTAATGGAACCGAGTTGATTTCCCAAGACCCCAAGAAAGCAGCGATTGAATGGACATGGATTGAAGTGGAGGGTCACCATTTTGATCCGGTTGCCATGAAACTGGTGTTTGAGCTCTGTTTGAAGCCTGCTTTTGGGTGGGGTGAGCCAGATGCTGCAGTGGTTGAGCAAAGTGAAGGTGCTTTGGGAAAAGTTCTTGATATCTATGAGAAAAGATTGGCAGAGTCCAAATATTTGGGAGGGGATTCTTTCAGTTTGGCTGATTTGCACCATATTCCTGTATTGGACTACCTGTTGGCGACACAGTCCAAGCCTCTGTTTACTTCTCGGCCCCTTGTCGATGCTTGGGTGGCTGATATCATGGCTAGGCCATCTTGGGCTAAGGTCCTTGCTCTTCGCAACTTATAG 651 48.39 MASVIKVHGIPISTATCRVLAVLYEKDLQFELVDVKMHEEEHKREPFLSINPFAQVPGFQDGDLTLFESRAITRYLTGNYAGNGTELISQDPKKAAIEWTWIEVEGHHFDPVAMKLVFELCLKPAFGWGEPDAAVVEQSEGALGKVLDIYEKRLAESKYLGGDSFSLADLHHIPVLDYLLATQSKPLFTSRPLVDAWVADIMARPSWAKVLALRNL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2509087 2510138 - Sed0016367.1 Sed07g0332 719196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0332 216 SFLD Main (cytGST) 4 212 - -
Sed07g0332 216 Gene3D - 91 215 - -
Sed07g0332 216 Gene3D Glutaredoxin 4 88 - -
Sed07g0332 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Sed07g0332 216 FunFam Glutathione S-transferase F2 4 88 - -
Sed07g0332 216 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Sed07g0332 216 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Sed07g0332 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Sed07g0332 216 Pfam Glutathione S-transferase, C-terminal domain 110 205 IPR004046 -
Sed07g0332 216 SFLD Main.5: Phi-like 4 212 - -
Sed07g0332 216 FunFam Glutathione S-transferase F2 89 211 - -
Sed07g0332 216 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Sed07g0332 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
Sed07g0332 216 CDD GST_C_Phi 93 211 IPR034347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0332 Sed-Chr7:2509087 Sed09g1225 Sed-Chr9:36509867 5.00E-94 dispersed
Sed07g0332 Sed-Chr7:2509087 Sed07g0333 Sed-Chr7:2511863 3.50E-79 tandem
Sed11g1114 Sed-Chr11:26854797 Sed07g0332 Sed-Chr7:2509087 3.70E-44 transposed
Sed07g0332 Sed-Chr7:2509087 Sed09g1223 Sed-Chr9:36499502 2.20E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0332 K00799 - csv:101212291 355.525