Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0379 ATGGCGGGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGGGTTGTTCCATTGAATACATGGGTGCTTATCTCCAATTTCAAGCTGGCCTACACCATTCTCCGCCGCGCAGACGGGACGTTCAACCGTGAGTTAGCGGAGTATCTCGAGCGGAAAGTTCCAGCCAATGTGATTCCGGTTGACGGGGTGTTCTCGTTCGACCATGTCGATCGAGCTTCTGGCCTCCTCAACCGAGTTTATCAGCTAGCCCCTGAGAATCAAGCTCGGTGGGGCATCATTGATCTTGAGAAGCCCTTAAGCATGTCTAAAGTTGTTCCTGTTATTCTGTTTTTTCATGGTGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACCTTTTGCCGGCGTATTGTTAGCATCTGCAAGGCAGTCGTTGTCTCGGTTAACTACCGTCGATCGCCTGAACATCGGTATCCATGTGCATATGAAGATGGCTGGGCTGCACTTAAATGGGTGAAGTCCAAAACATGGCTGCAAAGTGGGAAAGATTCTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGCGGCAACATTGCTCATCATGTTGCAGTTAGAGCAGCTAAAGAAGACGTCGAAGTATTAGGCAACATCCTTCTTCACCCGATGTTCGGGGGCGAAAAGAGAACCGAATCGGAAAAGAAACTCGACGGCAAATACTTCGTATCCATTCAAGACCGAGATTGGTACTGGAGAGCCTATCTCCCTGAAGGAGAAGACAGAGATCACCCAGCTTGCAACATATTTGGTCCGAAAGCCAAAAGCATAGCAGGATTTGACTTCCCAAAAAGTCTAGTTGTCGTAGCTGGTTTGGATCTGATGCAAGATTGGCAACTGGCTTATGTGCATGGCCTAAAAGACTCCGGTCACGACGTGAAACTTCTCTTCCTCGAACAGGCGACAATCGGGTTCTACTTCTTGCCAAATAATGAACATTTCTACTGTCTAATGGAAGAGATAAACAACTTCATCAACCCTTGA 1029 47.13 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENQARWGIIDLEKPLSMSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAKEDVEVLGNILLHPMFGGEKRTESEKKLDGKYFVSIQDRDWYWRAYLPEGEDRDHPACNIFGPKAKSIAGFDFPKSLVVVAGLDLMQDWQLAYVHGLKDSGHDVKLLFLEQATIGFYFLPNNEHFYCLMEEINNFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2849822 2852677 + Sed0026846.1 Sed07g0379 719243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0379 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Sed07g0379 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Sed07g0379 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Sed07g0379 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Sed07g0379 342 FunFam Gibberellin receptor GID1 1 342 - -
Sed07g0379 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
Sed07g0379 342 SUPERFAMILY alpha/beta-Hydrolases 101 341 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3545 Sed-Chr4:44853792 Sed07g0379 Sed-Chr7:2849822 2.60E-148 dispersed
Sed05g2332 Sed-Chr5:35787362 Sed07g0379 Sed-Chr7:2849822 1.40E-149 dispersed
Sed07g0379 Sed-Chr7:2849822 Sed07g0491 Sed-Chr7:3753320 2.30E-56 dispersed
Sed07g0379 Sed-Chr7:2849822 Sed09g1177 Sed-Chr9:36006367 3.30E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0379 K14493 - csv:101219912 685.256