Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0551 ATGGCGACGAGGAATCGAACCGCGCAGTTCAGAAGGCTGAGGGACGCCGTGAAGAGCGTCCGTGCTCCGTTATCTTCTTCGGCCGCTGGTTCGAGCGGTCCGGTGATTGAGATGGTCAGTTCGTCTCTTCTTCGTTCTAACCGCTCACCTTCTTACGCTCCTCTTAGCACGGAAGATCCAGGACCTTCAAGCAGTGATGCATTTAAGGTGGGTCTACCCCCAGCTTGGGTGGATGATACAGAAGAAATATCGGTTAATATACAAAATATTCGTCGGAAGATGGCGGAGTTGGTCAAAGCTCATTCTAAAGCTTTATTGCCTTCTTTTGCTGATGACAAAGAAGATCAACATACAATTGAGGCACTTACACAAGAGATTACTAATCTTCTGAAAATCTCTGAGAAGAGGTTGAAGAAAATTTCAAGTACTGGGTCCTCCGAGGATATTAACATTAGAAAAAATGTCCAGCGTTCTCTTGCTACAGAGCTTCAAAATCTTTCTATGGACCTTCGTAGAAGACAGTCAATGTACTTGAAACGTCTTCAGCAACAAAAGGAGGGACATGATGGAATTGATTTGGAGATAAATCTGAATGGCAGCAAAAGTCTACATGAGGATGATGAATATGGTGGATTTGGAATCAACGAAAACCAGACGATGACATTAGGAATCGACGAGCAGCACATGCAGGGGAGGGATAAAGAGATTAGACAGGTTATGGAAGGTTCTAATAACTTTCTCATGAGACGAAATAGTCACAATGTAACGAATGTATCTTTTTACTTGTAG 789 43.35 MATRNRTAQFRRLRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSNRSPSYAPLSTEDPGPSSSDAFKVGLPPAWVDDTEEISVNIQNIRRKMAELVKAHSKALLPSFADDKEDQHTIEALTQEITNLLKISEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGSKSLHEDDEYGGFGINENQTMTLGIDEQHMQGRDKEIRQVMEGSNNFLMRRNSHNVTNVSFYL 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4193985 4198818 - Sed0005074.2 Sed07g0551 719415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0551 262 SMART SynN_4 67 182 IPR006011 GO:0016020(InterPro)
Sed07g0551 262 MobiDBLite consensus disorder prediction 46 69 - -
Sed07g0551 262 Gene3D - 73 245 - -
Sed07g0551 262 SUPERFAMILY t-snare proteins 71 239 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Sed07g0551 262 MobiDBLite consensus disorder prediction 46 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0551 Sed-Chr7:4193985 Sed11g0395 Sed-Chr11:3785915 1.10E-69 dispersed
Sed07g0550 Sed-Chr7:4193985 Sed07g0551 Sed-Chr7:4193985 8.80E-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0551 K08489 - csv:101204192 393.275