Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0592 ATGATTACACGTAAAATGGACACACATAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTCCCGAAGAAAGATGTAGCTGCAATCATTCAACAATTTAACATTCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGAGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGCGATCCTCAACTTCCAATCCTACATCGTGCACTTGTTGAGAAAAGCCATGACATAAAAAATATTGAACGAGCTGTTGAGAAAAATGGGGACACCTTACATCAGCTAAAGGCATTAAATGCTGAGCAGGAGAAGGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTAAAAAAGGTCGAGTCCATGAAAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCCGAATACATGGAAGTTAAAGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACATTTTGAATGAATTAAAGGAGCCAATTGAGAAGCAAAAAAAGGAAAAGGCAAAGTTGGATGCTAAAACTAGAAAGTATAGTTCTCTCATTAATGACAATCACAAGAAAAGGATGGAACTTCAGGAAACTGAAAATCGTTTGGGGGTACAAGTGCAAGGAAAATTGAAAGAAATGGAAGATTTAAGGAAACAAGAAGAATCCCTTCAACAGAGAATCTTACAAGCTAAAGAGGAACTTGAAGCTGCTGAATTGGACCTTCAGAATTTGCGTCCTTACGAACATCCCAAGGAAGAAATTGAAGGGCTCCGTGCTCAAATTTTGGAGCTGGAAGATTCTGCGAGTCAGAAAAGAGTTTTGAAGTCAGAGATTGAAAGAAATATATACCAAAAAAGAAATAGTTTAAGGCAATGCCTGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAGGAATTCTGGAGCAGAGAAGATTTTTGAAGCTTATCACTGGCTTCAAGAACATCGCAATGAGTTCAAGAAGGAGGTGTATGGTCCAGTGTTACTAGAGGTTAATGTATCAAATCGGATTCATGCTGACTACTTAGAAGGTCATATTCCATCCTACGTATGGAAGGCCTTCATAACTCAAGATTCTGATGATCGTGACATCATGGTAAAAAACTTGGGCTCATTTGGTGTTCCTATATTAAACTATGTGGGAGGCGAAAGGCGCACAAATCAGCATTTCGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCCCGGCTAGACCAAGTTTTTGATGCTCCTGCAGCTGTAAAGGAGGTTTTGACCATGCAGTTTGGTTTGGAACATTCATATATTGGTTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGATAACCATTATCGATGGTCTCGCTCTAGATACGGGGGTCATATGTCTGGAAGTGTGGAACCAGTTGATCGCTCACGTCTTCTTTTGTGCAATTTGGATGCGGGAGAAATTGATGAGCTTCGGTCCAGGAAAAGTGAGCTAGAACAGTCTGTCTCTGCCTTAGAAGATAACTGTAAATCATGTCAGAATGAGCTAAGATTGATAGAGGATGAAGAAGCTAAACTCCGCAAACATCGGGATGACATTTTATTTACTGTGCAACATGAGAAGAGAAAACGCCGTGAAATGGAAAATCGTATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGAGGGAAGATGACTTGGATACTGTTTTGGCCAAGCTTGTCGACCAAGCTGCAAATTTCAATATTCAAAGGTTCCATTGTGCAATTGAAATTAAGACTTTGCTTGTGAAGGCTGTTTCCTATAGACAGAGCTTGACTAAGAACCATATGTCCTCCATTGAAGCTGAATCAAAGATCAAAGAAGTGGAGGTAAATCTGAAGCAGCATGAAAAGCTTGCTCTGCAAGCATCTGTGCAGTTCGAGTACTGCAAGAAGGAAGTTGAGGACTATCGACAGCAACTTTTAGTTGCTAAGAAGCATGCAGAATCTATTGCTGTGATTACACCTGACCTTGAGAAGGAATTTCTTGAGATGGCTACTACAATTGAGGAATTGGAGGCCGCTATTCAAGATAATATTTCGCAAGCTAATTCCATTCTATTCTTAAACCATAATGTGCTCGAGGAATATGAACATCGTCAGCATCAGATAAATACCATTGCACGAAAACTAGAAGCTGATAAACATGAACTGAGGAAGTTTACGGCTGAAGTTGATGAGCTGAAGGGAAATTGGCTCCCAACATTAAGAAAACTTGTTTCTCAGATAAATGTGACTTTTAGCCGCAATTTTCAAGAGATGGCTGTAGCTGGAGAAGTCTTATTGGATGAGCACGATATGGACTTCGATCAATTTGGGATACTCATTAAAGTAAAATTCAGACAAGCAGGTCAGCTCCAGGTTCTCAGTGCACATCACCAATCTGGAGGGGAACGCTCCGTGTCGACGATTCTGTATCTTGTCTCTCTTCAAGACCTTACTAACTGCCCGTTTAGAGTAGTTGACGAGATAAACCAAGGAATGGATCCCATAAATGAACGGAAGATGTTCCAGCAATTGGTGAGAGCTGCCAGTCAAACGAATACACCACAGTGTTTCCTACTTACTCCAAAGTTACTCCCAGAACTGGAATATAGTGAGGCCTGTAGCATTCTAAATATAATGAATGGTCCATGGATCGAACAGCCCTCTAGAGCATGGAGCAATGGAGATAGCTGGGGAACATTGATGAACTACGTAGGAGAAAGCCGATGTTGA 2838 40.13 MITRKMDTHNKSEWLFNGKVVPKKDVAAIIQQFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRALVEKSHDIKNIERAVEKNGDTLHQLKALNAEQEKDVERVRQRDELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANILNELKEPIEKQKKEKAKLDAKTRKYSSLINDNHKKRMELQETENRLGVQVQGKLKEMEDLRKQEESLQQRILQAKEELEAAELDLQNLRPYEHPKEEIEGLRAQILELEDSASQKRVLKSEIERNIYQKRNSLRQCLDRLKDMENTNTKLLQALRNSGAEKIFEAYHWLQEHRNEFKKEVYGPVLLEVNVSNRIHADYLEGHIPSYVWKAFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQVFDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDELRSRKSELEQSVSALEDNCKSCQNELRLIEDEEAKLRKHRDDILFTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVLAKLVDQAANFNIQRFHCAIEIKTLLVKAVSYRQSLTKNHMSSIEAESKIKEVEVNLKQHEKLALQASVQFEYCKKEVEDYRQQLLVAKKHAESIAVITPDLEKEFLEMATTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQHQINTIARKLEADKHELRKFTAEVDELKGNWLPTLRKLVSQINVTFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 945
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4494478 4511150 + Sed0026614.2 Sed07g0592 719456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0592 945 Coils Coil 140 188 - -
Sed07g0592 945 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 2 937 IPR027131 GO:0000724(InterPro)|GO:0000724(PANTHER)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Sed07g0592 945 Coils Coil 217 251 - -
Sed07g0592 945 Coils Coil 300 320 - -
Sed07g0592 945 Coils Coil 563 590 - -
Sed07g0592 945 Coils Coil 734 771 - -
Sed07g0592 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 896 IPR027417 -
Sed07g0592 945 Coils Coil 639 666 - -
Sed07g0592 945 Gene3D - 1 105 IPR027417 -
Sed07g0592 945 Coils Coil 514 558 - -
Sed07g0592 945 Coils Coil 101 121 - -
Sed07g0592 945 FunFam Structural maintenance of chromosomes 5 741 912 - -
Sed07g0592 945 Coils Coil 192 212 - -
Sed07g0592 945 Gene3D - 739 914 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0592 Sed-Chr7:4494478 Sed13g0248 Sed-Chr13:1639361 8.00E-11 dispersed
Sed07g0591 Sed-Chr7:4494478 Sed07g0592 Sed-Chr7:4494478 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0592 K22803 - csv:101210248 1682.92