Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0639 ATGGTGAAGCCTAGGAAGAAGGTTTTTTACGTCGATGAACAATGCACGCTTCGCCTCACTGAAATGTTCGGAAGGGCCACCAAGTCTATTTTGGGCTTCTTTCTCATGGTGGTGCTTTGCAATGGCGTTCATTACTTTTTGAAGCCATTTTCTCAACCTCGCATTAGTTCTGATACCGTCGTAGGTTTGATTGTTGGCAACTTCGTAAGGAAACAAATCGATTTATCGATGGTTAAGACGCTGAGTTACATCGTTGACTTCGGTATGATATGCTACATGTTCGTGCTGGGATTGGAGATGGATCCACATGTATTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCTGGAATGATTTCTACACTCGTCTTAGCCTGCTCGATAATCCCATTTGTCGGCTTTGCAAAGTCAAAAGAGATCACTTTCATCCTCTCCATCTCTACTATCCTCTCTAGCACAGCTTCTCCCGTGCTAACCCGTTTGATCACCAGTCTTAAAATAGGCAGGTCAGATATAGGCCGGCTTGTTATTGCTGCTGGGATGCATTCTGATTTTATATCTACTCTCGGTATCTGTATCGGTTATCTCTTTTGCAAATGTCAAGAAACACGAATCTCCACTATAAAAGGTTTTGAGTTAGGTGTTATGTTACTGATCCAGTCAATGCTCACAGCTAAGGTTTCGCCTGTATTCATGAATTGGGTAAATAATGAAAACCCTGAGGGTAAACCTATGAAGGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTGTATTTGGTTACAATCCGATTCTCAGTGCATTCTTAGCCGGAACCTTCTTACCTCGAGAAGGTAGAGTATCAAGATGGGCCATTGGAAAAATTAACTACCTGCTTACTACCATTTTCTATCCTATTTTCTTCTTTTGGATGGGGATTGAATGCAAGTTGAGTGACTTTGCACCTGGACAAATAATGACATGGGTCAGGTTAATTCTGCTTTTTGCGATTGCAACCGTAGGAAAAGTTGCTGGTACTGTCATCGCTGGGGCGATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTGGCCATTGCTGCGAAAAACGCTGGAATGACGTCCGCATCCACGAGCATTGTGATGGTAATTGTAATCTTCTCCACAGTCGTGCATGGTCCAAAAGTTGTAGAACATATAATCAAAAGGGCAAGGAAACGGACACCTACGCACCGAATGGCACTCCAATTGCTTGATCCATCAAGTGAACTGAAGATCTTGTTATGTATACATGGACCTCAGAACACTACAGCGGCCATTAACATCATGGAAATTTCTCGAGGGACGACTAACCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTGACGGATGAAATAGCAGCCACATTAGTGCAAGGTGAAGGAGTGGACAGCGTGACTGTAACTCACCCGGGAGTTACACAAATGCGAGATCAAGTGACCGCTGAAATTCAGAGTTATGTAGATGAAAATAGTGAAGGAATTACCCTTAGAAGAATGTTAGCTCTCTCAACATTGAATTGTATGGCTCAGGACATTTGCATTTTGGCAGAGGATTTGATGGGAGCTCTAATCATACTGCCATTCCATAAGAGCCAGCGTTCAGACGGGTTGTTGAGTGAGAGCTTTGCAGGTTTCCGCTACGTAAATCGCAAGGTTCTCAGAAATGCCCCTTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGAACAGTAGAGAAAATTTCGAGGACGCATGTATCTCAGAATGTGGCCGTCATTTTCATTGGCGGTAAAGACGACCGAGAAGCATTAGCCTATGCTGGCCGAGTAGCAAGGCATCCTGGAGTCAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGAACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACTCGACGATGAATGTTTTGCTTATTTTTATGAGCGACATGTGGCTGGTGGGCGTGTTGCCTATGTCGAAAAACACCTTGCCAGCTCCTCCGAGACGTATTCCACTTTGAAATCACTGGAAGGGCAATATGCACTCATAATCGTCGGTCGAGGGGGGAAGGTCAACTCGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGATATTCTTTCCGGGTCTGAATTCTCTGTTAGAACCTCAGTTTTGATCATCCAACATTACAATCTAAAGGGAGAACTAGATGGGCTTGATGAAGATTTTTCAATTATGTAG 2364 44.12 MVKPRKKVFYVDEQCTLRLTEMFGRATKSILGFFLMVVLCNGVHYFLKPFSQPRISSDTVVGLIVGNFVRKQIDLSMVKTLSYIVDFGMICYMFVLGLEMDPHVFFKAPTRDAKVAYAGMISTLVLACSIIPFVGFAKSKEITFILSISTILSSTASPVLTRLITSLKIGRSDIGRLVIAAGMHSDFISTLGICIGYLFCKCQETRISTIKGFELGVMLLIQSMLTAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTVFGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLTTIFYPIFFFWMGIECKLSDFAPGQIMTWVRLILLFAIATVGKVAGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKNAGMTSASTSIVMVIVIFSTVVHGPKVVEHIIKRARKRTPTHRMALQLLDPSSELKILLCIHGPQNTTAAINIMEISRGTTNPGVVVYVTDMIELTDEIAATLVQGEGVDSVTVTHPGVTQMRDQVTAEIQSYVDENSEGITLRRMLALSTLNCMAQDICILAEDLMGALIILPFHKSQRSDGLLSESFAGFRYVNRKVLRNAPCSVGILVDRGLGTVEKISRTHVSQNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRLDDECFAYFYERHVAGGRVAYVEKHLASSSETYSTLKSLEGQYALIIVGRGGKVNSVLTFGMNDWQQCPELGPIGDILSGSEFSVRTSVLIIQHYNLKGELDGLDEDFSIM 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4814645 4819429 + Sed0016504.1 Sed07g0639 719503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0639 787 Gene3D - 26 426 IPR038770 -
Sed07g0639 787 PANTHER CATION/H + ANTIPORTER 31 772 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Sed07g0639 787 Gene3D - 441 740 - -
Sed07g0639 787 Pfam Sodium/hydrogen exchanger family 43 410 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed07g0639 787 FunFam Cation/H(+) antiporter 28 27 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0639 Sed-Chr7:4814645 Sed13g0816 Sed-Chr13:6035580 4.70E-89 dispersed
Sed07g0639 Sed-Chr7:4814645 Sed09g1353 Sed-Chr9:37589974 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0639 K26731 - csv:101211645 1373.61