Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0656 ATGTTCTTGGATGTATTTTTTGTTTATGACTTTGAAATTCTTGGTTGCGACTTGGATACAGCTAATGTGCGAGGTGTGGACCCTACAAAAGAGTATAATTCATCCGGGCCGGGAAATGTAGCTTGGAAAGAGAGAGTTGATGGGTGGAAGATGAAGCAGGAGAAGAATGCTGTACCAATGAGCACAACCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCTTGTACAGATGTGCTTGTTGATGACTCCTTATTAAATGACGAAGCTCGCCAGCCTCTCTCAAGAAAGGTTTCTCTTCCGTCATCAAGGATAAACCCTTATCGAATGGTGATTGTTCTCCGGCTTGTGATTCTTGTTTTTTTCTTGCACTACCGAATCACGAATCCAGTACGCAATGCATATGCTCTATGGTTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCAAAGTGGCTTCCTGTAAATCGTGAGACTTATCTTGATCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCATCACAACTTGCTTCTGTTGACATTTTCGTGAGTACAGTTGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACCGTGCTATCGATCCTTGCCGTTGACTACCCAGTTGACAAAGTTTCATGTTATGTCTCTGATGATGGAGCTGCCATGTTGACTTTCGAAGCATTATCCGAGACATCAGAGTTTGCAAGGACATGGGTTCCTTTCTGCAAGAAATACAACATCGAGCCTCGGGCTCCTGAATGGTACTTTGCTCAGAAAATTGATTACTTGAAGGATAAAGTCCATCCATCATTTGTCAAAGATCGAAGAGCGATGAAGAGAGAATATGAGGAATTTAAGGTTCGCATCAATGGTCTAGTATCAAAGGCACAGAAGGTTCCCGAAGAAGGGTGGAGCATGCAAGATGGAACTCCGTGGCCCGGAAATAATACTAGAGACCATCCGGGTATGATCCAGGTTTTCTTAGGCCAAAACGGTGGACTTGACTCCGAAGGTAACGAGTTGCCTCGTCTAGTTTATGTATCTCGTGAAAAACGTCCAGGATTTCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTAGTTCGAGTGTCCGCTGTCCTTACTAATGGCCCATTCTTGTTGAATCTTGACTGTGATCATTACATAAACAATAGCAAGGCATTGAGAGAAGCTATGTGTTTCATGATGGATCCAAACCTTGGCAAATATGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAGGAACGATCGATATGCCAATCGTAACACTGTTTTCTTTGATATAAATTTAAGAGGTTTAGATGGTCTGCAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAATAGAACTGCACTGTATGGTTATGAACCTCCTCTAAAACCGAAGAATCGAAAATCAGGGTTTCTATCTTCACTCTGTGGTGGATCTCGAAAGAACTCAAAATCAAGTAAAAGAAGTCCAGAAAAGAAGAAATCAAGTAAGCATGTGGACCCAACCGTGCCGATTTTCAATCTTGATGACATTGAAGTAGTTGAAGGTGTTGGGTATGATGATGAGAAGGCACTGCTAATGTCACAATTGACCCTCGAGCAAAGGTTTGGCCAATCTGCTGTTTTTGTTGCTTCGACCCTTATGGAAAATGGTGGTGTTCTGCAATCTGCAACGCCCGAGTCTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACCGACTGGGGATCAGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATCCTTACGGGATTCAAGATGCATGCCCGTGGTTGGCGGTCGATTTATTGCATGCCAAAGCGTCCTGCCTTTAAAGGGTCTGCACCTATCAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCACTTGGTTCTGTGGAGATTCTTTTGAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTTGCATATGTGAACACGACAATCTATCCGATCACCGCTATTCCTCTTCTCTTGTATTGTACCTTACCAGCTGTGTGTCTGTTGACAAACAAGTTCATTATTCCGCAGATTAGTAACATTGCAAGTATATGGTTTATATCCCTCTTCATCTCCATCTTTGCGACTGGAATTCTCGAGATGAGATGGAGCGGGGTTGGAATTGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATCGGCGGCGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTTGCTGGAATCGACACCAACTTCACAGTCACGTCCAAGGCATCTGATGAAGAAGGGGACTTTACCGAGCTTTACTTATTTAAATGGACGACTCTTCTCATCCCACCAACAACACTCCTCATCGTAAACTTGGTCGGGGTCGTAGCGGGGATATCTTATGCAATCAACAGCGGATACCAATCATGGGGACCATTGTTTGGCAAGCTATTTTTTGCCTTTTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAACAGAACGCCCACCATCGTTGTCGTGTGGTCGATTCTGCTTGCTTCCATCTTCTCATTGTTATGGGTGAGGATTGATCCGTTCACTACATCAGTTACAGGTCCCGACGTCGAAGAGTGTGGAATCAACTGCTAG 2748 43.81 MFLDVFFVYDFEILGCDLDTANVRGVDPTKEYNSSGPGNVAWKERVDGWKMKQEKNAVPMSTTHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSLPSSRINPYRMVIVLRLVILVFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLASVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARTWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVSKAQKVPEEGWSMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPLKPKNRKSGFLSSLCGGSRKNSKSSKRSPEKKKSSKHVDPTVPIFNLDDIEVVEGVGYDDEKALLMSQLTLEQRFGQSAVFVASTLMENGGVLQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLLYCTLPAVCLLTNKFIIPQISNIASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFTELYLFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTSVTGPDVEECGINC 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4913173 4920236 + Sed0000501.5 Sed07g0656 719520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0656 915 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 109 884 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Sed07g0656 915 FunFam Cellulose synthase 306 480 - -
Sed07g0656 915 Pfam Cellulose synthase 189 908 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Sed07g0656 915 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 336 480 IPR029044 -
Sed07g0656 915 MobiDBLite consensus disorder prediction 491 520 - -
Sed07g0656 915 SUPERFAMILY Nucleotide-diphospho-sugar transferases 203 723 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0654 Sed-Chr7:4913173 Sed07g0656 Sed-Chr7:4913173 0.00E+00 dispersed
Sed07g0656 Sed-Chr7:4913173 Sed12g2280 Sed-Chr12:33014775 0.00E+00 dispersed
Sed07g0655 Sed-Chr7:4913173 Sed07g0656 Sed-Chr7:4913173 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0656 K10999 - csv:101206590 1731.07