Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0728 ATGATTATGACTGTGAAGAATTCGACGATGTTGACTCCAGCGGAGGAGACGCCACGCCGAAGACTGTGGATCTCCAACATCGACCTCGTGATTTCCAATATCCACACGCCCAGCGTATACTTCTACCGCCCGACCGGCACTTCTGATTTCTTCAACGCTCGGGTTCTCAAGGAAGGTCTCAGCAAGGCACTGATCAACTGTAATGCCCATGGCATTCTCCTTGTCCAGCCCGAGACCACGGCGGTCATCGATGATTTCGGGGATTTCACCCCCACCTTACAGCTTCGCCAGCTTATTCCGGACGTCGATTACTCTGCTGGAATCGAATCGTTTCCCTTGGTTTTGACGCACTTCAAATGCGGCGGCATTTCTCTCGGTGTCGGAATACAACACAAGGTGGCTGACGGTTTCTCCGGTCTTCACTTTGTCAACACTTGGTCCGACATGTCGCGCGGCCTCGACCTCAAGCTGTCGCCATTTATGGACCGGTCCCTTCTCCGTGCACGGGACCCACCCCAACCGATCTTCCGACATGTCGAATACCAACCGTCTCCGCCCACGAAAACCCCGATCAAACCCGACCCAACCGGAACCAGTGTCTCCATCTTCAAATTCAGCCGCCAGCAGCTCAACCTCCTCAAAGCCAAATCCAAGGAAAAGGGCAACACCACCAACTACAGCTCGTGCACGTGCAAGGCACGTGACCTCCCCGATGATCAGGAAACAAAACTCGTCCTTACTACCGATGGTCGCACTCGGTTGCGCCCGCCGCTCCCCGAGGGTTACTTTGGCAATGTCATCTTCGCAGCAACGCTAGTCGTCGTTGCTGGCGATCTGATATCGAATCCGGCATGGTTCGCCAGCAGCAAGATCCACGATGCCATAATGCAGATGGACAACGACTATCTGAGATCGATGATAGACTATCTCGAGACTGAGCCGGACATAACTGCGTTGGTCCATGGCGCTCATTCTTTTAGGTGCCCGAATTTAGCCATCACGAGTTGGGCTCGACTGCCGATTCACGATGCCGATTTCGGATGGGGACGGCCCATTTTTATGGGCCCAGGAGAAATGGCGTACGAGGGATTTTCGTTTATAATTCCGAGTGCTTCCGACGACGGCAGCTTGTTGGTTGCAATTTCACTACAAACTCCACATATGAAGGTTTTTGAAAATTATTTCTTTGATATTTGA 1197 52.63 MIMTVKNSTMLTPAEETPRRRLWISNIDLVISNIHTPSVYFYRPTGTSDFFNARVLKEGLSKALINCNAHGILLVQPETTAVIDDFGDFTPTLQLRQLIPDVDYSAGIESFPLVLTHFKCGGISLGVGIQHKVADGFSGLHFVNTWSDMSRGLDLKLSPFMDRSLLRARDPPQPIFRHVEYQPSPPTKTPIKPDPTGTSVSIFKFSRQQLNLLKAKSKEKGNTTNYSSCTCKARDLPDDQETKLVLTTDGRTRLRPPLPEGYFGNVIFAATLVVVAGDLISNPAWFASSKIHDAIMQMDNDYLRSMIDYLETEPDITALVHGAHSFRCPNLAITSWARLPIHDADFGWGRPIFMGPGEMAYEGFSFIIPSASDDGSLLVAISLQTPHMKVFENYFFDI 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5444868 5447711 - Sed0006340.1 Sed07g0728 719592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0728 398 Gene3D - 188 398 IPR023213 -
Sed07g0728 398 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 389 IPR050317 GO:0016747(PANTHER)
Sed07g0728 398 Pfam Transferase family 3 394 - -
Sed07g0728 398 Gene3D - 3 183 IPR023213 -
Sed07g0728 398 FunFam Tryptamine hydroxycinnamoyl transferase 185 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0728 Sed-Chr7:5444868 Sed08g0018 Sed-Chr8:62710 1.70E-50 dispersed
Sed07g0727 Sed-Chr7:5418562 Sed07g0728 Sed-Chr7:5444868 2.70E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0728 K13065 - csv:101214857 621.698