Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0741 ATGAATCTTCTTGGTATTTTAGTCCCCATGTGGGTTTTGTTCCCAATAATTGATGCCAGACCACAGCTTGTTGGGGTTTCAATTTCTAGGACTGTTTTTGCTTCTCAGAAACAACCCTTTTCTCACATTGTGGCAAAAATGGAAGCTCAATCCCCAGGAGTTGTTGCTGAGGTTAGAGTTGTTCACCACCAGGATTTGAACAAGAGTATTCTCATAGCATTGATTGTTTCTACCACACTTCTTGGAGCTATATTGTTGTCCCTTTTGTGCTTTTGGATATGTCGTCGAAAATCGTCGAATCTTGATGATGGAGAATGTCAAAAGAATTTGGAGGCTTCGAAAGGGATGACAATAAATCCCATCAAATCTAGATTTAACTCCTTGAGGTTGGCTAATTTCAAAGGCTCGGTTTCCACGATTGACTATAAACTGTTGGAAGCAGCTACTGATCACTTCAGCAAAAGCAATGTTTTGGGAGAAGGCGGTACCGGGCATGTTTACAAAGCCCGGTTCAATGATAAAATGCTGGCGGCTGTGAAGAGAATAGAATATGGAGGACCAGATGTTGAAAGAGAATTTGAGAATGAGGTGAACTGGCTGTGTAAAATTCGACATCAAAATGTAATCAAACTCTTGGGACATTGCATTCATGGCGAAACACGGTTTCTTGTTTATGAGATGATGCAAAATGGATCTTTGGAGTCTCAATTGCACGGACCTTCTCATGGATCGGCTTTAACTTGGCATCTTCGAATGAAGATCGCTGTTGACATTGCAAGAGGATTGGAGTATCTTCACGAGCACCGAAGTCCTCCAGTCGTTCATCGAGATTTGAAATCATCAAATATCCTTCTAGATTCAGACTTTAATGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAAAACATAAAGCTCTCTGGAACTTTGGGATATGTCGCCCCGGAATACCTTTTAGATGGTATGCAACTTTACGATGTCGACCACAGATTTCATATTTTTGTCTTATATTTCATTTTCTTTGACATACTTGTTCTCTCATTAAAACTTAAAAGCTTCTCATAG 1080 40.19 MNLLGILVPMWVLFPIIDARPQLVGVSISRTVFASQKQPFSHIVAKMEAQSPGVVAEVRVVHHQDLNKSILIALIVSTTLLGAILLSLLCFWICRRKSSNLDDGECQKNLEASKGMTINPIKSRFNSLRLANFKGSVSTIDYKLLEAATDHFSKSNVLGEGGTGHVYKARFNDKMLAAVKRIEYGGPDVEREFENEVNWLCKIRHQNVIKLLGHCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHLRMKIAVDIARGLEYLHEHRSPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGMQLYDVDHRFHIFVLYFIFFDILVLSLKLKSFS 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5539640 5542764 + Sed0017643.3 Sed07g0741 719605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0741 359 Gene3D Phosphorylase Kinase; domain 1 114 227 - -
Sed07g0741 359 SMART serkin_6 152 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g0741 359 FunFam Os07g0541700 protein 228 316 - -
Sed07g0741 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g0741 359 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524(InterPro)
Sed07g0741 359 Pfam Protein kinase domain 153 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g0741 359 PANTHER OS01G0750732 PROTEIN 57 328 IPR050885 -
Sed07g0741 359 SUPERFAMILY Protein kinase-like (PK-like) 126 328 IPR011009 -
Sed07g0741 359 ProSiteProfiles Protein kinase domain profile. 152 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g0741 359 Gene3D Transferase(Phosphotransferase) domain 1 228 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0741 Sed-Chr7:5539640 Sed09g1468 Sed-Chr9:38470732 2.80E-134 dispersed
Sed07g0740 Sed-Chr7:5539640 Sed07g0741 Sed-Chr7:5539640 3.10E-185 tandem
Sed07g0741 Sed-Chr7:5539640 Sed07g0742 Sed-Chr7:5539640 3.00E-184 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79434 PF00069 Pkinase 1.10E-36 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0741 - - - 0.0